Microarray karyotyping of commercial wine yeast strains reveals shared, as well as unique, genomic signatures by Levine R Paul, Dunn Barbara, Sherlock Gavin

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GC-Content Normalization for RNA-Seq Data by Risso Davide, Schwartz Katja, Sherlock Gavin, Dudoit Sandrine

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The Longhorn Array Database (LAD): An Open-Source, MIAME compliant implementation of the Stanford Microarray Database (SMD) by Iyer Vishwanath R, Sherlock Gavin, Killion Patrick J

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The XBabelPhish MAGE-ML and XML Translator by Sherlock Gavin, Wymore Farrell, Maier Don, Ball Catherine A

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GeneXplorer: an interactive web application for microarray data visualization and analysis by Matese John C, Demeter Janos, Rees Christian A, Botstein David, Sherlock Gavin

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Caryoscope: An Open Source Java application for viewing microarray data in a genomic context by Ball Catherine A, Hernandez-Boussard Tina, Rees Christian A, Awad Ihab AB, Sherlock Gavin

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Rnnotator: an automated <it>de novo </it>transcriptome assembly pipeline from stranded RNA-Seq reads by Blow Matthew, Meng Xiandong, Fang Zhide, Bruno Vincent M, Martin Jeffrey, Zhang Tao, Sherlock Gavin, Snyder Michael, Wang Zhong

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OntologyWidget – a reusable, embeddable widget for easily locating ontology terms by Skene JH Pate, Jin Heng, Zachariah Zachariah K, Nitzberg Michael, Wymore Farrell, Beauheim Catherine C, Ball Catherine A, Sherlock Gavin

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