SHAPER: A Web Server for Fast and Accurate SHAPE Reactivity Prediction by Yuanzhe Zhou, Jun Li, Travis Hurst, Shi-Jie Chen, Shi-Jie Chen, Shi-Jie Chen

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Theory Meets Experiment: Metal Ion Effects in HCV Genomic RNA Kissing Complex Formation by Li-Zhen Sun, Li-Zhen Sun, Xiao Heng, Shi-Jie Chen, Shi-Jie Chen, Shi-Jie Chen

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RNA 3D Structure Prediction Using Coarse-Grained Models by Jun Li, Shi-Jie Chen

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Graph deep learning locates magnesium ions in RNA by Yuanzhe Zhou, Shi-Jie Chen

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VfoldCPX Server: Predicting RNA-RNA Complex Structure and Stability. by Xiaojun Xu, Shi-Jie Chen

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Coarse-grained prediction of RNA loop structures. by Liang Liu, Shi-Jie Chen

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TBI server: a web server for predicting ion effects in RNA folding. by Yuhong Zhu, Zhaojian He, Shi-Jie Chen

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CRISPR-Cas9 cleavage efficiency correlates strongly with target-sgRNA folding stability: from physical mechanism to off-target assessment by Xiaojun Xu, Dongsheng Duan, Shi-Jie Chen

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Vfold: a web server for RNA structure and folding thermodynamics prediction. by Xiaojun Xu, Peinan Zhao, Shi-Jie Chen

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Propagation of a rapid cell-to-cell H2O2 signal over long distances in a monolayer of cardiomyocyte cells by Yosef Fichman, Linda Rowland, Thi Thao Nguyen, Shi-Jie Chen, Ron Mittler

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Multicentric Gliomas Misdiagnosed as Metastatic Tumors: One Case Report and Literature Review by Peng WANG, Ming-can WU, Shi-jie CHEN, Yong YANG, Guang-rui ZHAO

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Microsurgery Resection of Intrinsic Insular Tumors via Transsylvian Surgical Approach in 12 Cases by Peng Wang, Ming-can Wu, Shi-jie Chen, Xian-ping Xu, Yong Yang, Jie Cai

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Possible mechanisms of lycopene amelioration of learning and memory impairment in rats with vascular dementia by Ning-Wei Zhu, Xiao-Lan Yin, Ren Lin, Xiao-Lan Fan, Shi-Jie Chen, Yuan-Ming Zhu, Xiao-Zhen Zhao

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Nanopore electric snapshots of an RNA tertiary folding pathway by Xinyue Zhang, Dong Zhang, Chenhan Zhao, Kai Tian, Ruicheng Shi, Xiao Du, Andrew J. Burcke, Jing Wang, Shi-Jie Chen, Li-Qun Gu

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Biomotors, viral assembly, and RNA nanobiotechnology: Current achievements and future directions by Lewis Rolband, Damian Beasock, Yang Wang, Yao-Gen Shu, Jonathan D. Dinman, Tamar Schlick, Yaoqi Zhou, Jeffrey S. Kieft, Shi-Jie Chen, Giovanni Bussi, Abdelghani Oukhaled, Xingfa Gao, Petr Šulc, Daniel Binzel, Abhjeet S. Bhullar, Chenxi Liang, Peixuan Guo, Kirill A. Afonin

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Computational Pipeline for Reference-Free Comparative Analysis of RNA 3D Structures Applied to SARS-CoV-2 UTR Models by Julita Gumna, Maciej Antczak, Ryszard W. Adamiak, Janusz M. Bujnicki, Shi-Jie Chen, Feng Ding, Pritha Ghosh, Jun Li, Sunandan Mukherjee, Chandran Nithin, Katarzyna Pachulska-Wieczorek, Almudena Ponce-Salvatierra, Mariusz Popenda, Joanna Sarzynska, Tomasz Wirecki, Dong Zhang, Sicheng Zhang, Tomasz Zok, Eric Westhof, Zhichao Miao, Marta Szachniuk, Agnieszka Rybarczyk

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Cas9-specific immune responses compromise local and systemic AAV CRISPR therapy in multiple dystrophic canine models by Chady H. Hakim, Sandeep R. P. Kumar, Dennis O. Pérez-López, Nalinda B. Wasala, Dong Zhang, Yongping Yue, James Teixeira, Xiufang Pan, Keqing Zhang, Emily D. Million, Christopher E. Nelson, Samantha Metzger, Jin Han, Jacqueline A. Louderman, Florian Schmidt, Feng Feng, Dirk Grimm, Bruce F. Smith, Gang Yao, N. Nora Yang, Charles A. Gersbach, Shi-jie Chen, Roland W. Herzog, Dongsheng Duan

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