Showing 1 - 16 results of 16 for search 'Shira L Broschat', query time: 0.04s Refine Results
  1. 1
    PASS: Protein Annotation Surveillance Site for Protein Annotation Using Homologous Clusters, NLP, and Sequence Similarity Networks

    PASS: Protein Annotation Surveillance Site for Protein Annotation Using Homologous Clusters, NLP, and Sequence Similarity Networks by Jin Tao, Kelly A. Brayton, Kelly A. Brayton, Kelly A. Brayton, Shira L. Broschat, Shira L. Broschat, Shira L. Broschat

    Published 2021-09-01
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  2. 2
    Prediction of T4SS Effector Proteins for Anaplasma phagocytophilum Using OPT4e, A New Software Tool

    Prediction of T4SS Effector Proteins for Anaplasma phagocytophilum Using OPT4e, A New Software Tool by Zhila Esna Ashari, Kelly A. Brayton, Kelly A. Brayton, Kelly A. Brayton, Shira L. Broschat, Shira L. Broschat, Shira L. Broschat

    Published 2019-06-01
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  3. 3
    Sequence-Based Discovery of Antibacterial Peptides Using Ensemble Gradient Boosting

    Sequence-Based Discovery of Antibacterial Peptides Using Ensemble Gradient Boosting by Ehdieh Khaledian, Shira L. Broschat

    Published 2020-12-01
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  4. 4
    Whole Proteome Clustering of 2,307 Proteobacterial Genomes Reveals Conserved Proteins and Significant Annotation Issues

    Whole Proteome Clustering of 2,307 Proteobacterial Genomes Reveals Conserved Proteins and Significant Annotation Issues by Svetlana Lockwood, Kelly A. Brayton, Kelly A. Brayton, Kelly A. Brayton, Jeff A. Daily, Shira L. Broschat, Shira L. Broschat, Shira L. Broschat

    Published 2019-02-01
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  5. 5
    Alignment-free clustering of large data sets of unannotated protein conserved regions using minhashing

    Alignment-free clustering of large data sets of unannotated protein conserved regions using minhashing by Armen Abnousi, Shira L. Broschat, Ananth Kalyanaraman

    Published 2018-03-01
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  6. 6
    A Fast Alignment-Free Approach for De Novo Detection of Protein Conserved Regions.

    A Fast Alignment-Free Approach for De Novo Detection of Protein Conserved Regions. by Armen Abnousi, Shira L Broschat, Ananth Kalyanaraman

    Published 2016-01-01
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  7. 7
    Whole-Proteome Analysis of Twelve Species of Alphaproteobacteria Links Four Pathogens

    Whole-Proteome Analysis of Twelve Species of Alphaproteobacteria Links Four Pathogens by Yunyun Zhou, Douglas R. Call, Shira L. Broschat

    Published 2013-11-01
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  8. 8
    ApicoAP: the first computational model for identifying apicoplast-targeted proteins in multiple species of Apicomplexa.

    ApicoAP: the first computational model for identifying apicoplast-targeted proteins in multiple species of Apicomplexa. by Gokcen Cilingir, Shira L Broschat, Audrey O T Lau

    Published 2012-01-01
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  9. 9
    Automated Confirmation of Protein Annotation Using NLP and the UniProtKB Database

    Automated Confirmation of Protein Annotation Using NLP and the UniProtKB Database by Jin Tao, Kelly A. Brayton, Shira L. Broschat

    Published 2020-12-01
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  10. 10
    A Systematic Approach to Bacterial Phylogeny Using Order Level Sampling and Identification of HGT Using Network Science

    A Systematic Approach to Bacterial Phylogeny Using Order Level Sampling and Identification of HGT Using Network Science by Ehdieh Khaledian, Kelly A. Brayton, Shira L. Broschat

    Published 2020-02-01
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  11. 11
    Using an optimal set of features with a machine learning-based approach to predict effector proteins for Legionella pneumophila.

    Using an optimal set of features with a machine learning-based approach to predict effector proteins for Legionella pneumophila. by Zhila Esna Ashari, Kelly A Brayton, Shira L Broschat

    Published 2019-01-01
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  12. 12
    SU-QMI: A Feature Selection Method Based on Graph Theory for Prediction of Antimicrobial Resistance in Gram-Negative Bacteria

    SU-QMI: A Feature Selection Method Based on Graph Theory for Prediction of Antimicrobial Resistance in Gram-Negative Bacteria by Abu Sayed Chowdhury, Douglas R. Call, Shira L. Broschat

    Published 2020-12-01
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  13. 13
    PARGT: a software tool for predicting antimicrobial resistance in bacteria

    PARGT: a software tool for predicting antimicrobial resistance in bacteria by Abu Sayed Chowdhury, Douglas R. Call, Shira L. Broschat

    Published 2020-07-01
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  14. 14
    An optimal set of features for predicting type IV secretion system effector proteins for a subset of species based on a multi-level feature selection approach.

    An optimal set of features for predicting type IV secretion system effector proteins for a subset of species based on a multi-level feature selection approach. by Zhila Esna Ashari, Nairanjana Dasgupta, Kelly A Brayton, Shira L Broschat

    Published 2018-01-01
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  15. 15
    Sequence determinants of human-cell entry identified in ACE2-independent bat sarbecoviruses: A combined laboratory and computational network science approach

    Sequence determinants of human-cell entry identified in ACE2-independent bat sarbecoviruses: A combined laboratory and computational network science approach by Ehdieh Khaledian, Sinem Ulusan, Jeffery Erickson, Stephen Fawcett, Michael C. Letko, Shira L. Broschat

    Published 2022-05-01
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  16. 16
    Identification of Anaplasma marginale type IV secretion system effector proteins.

    Identification of Anaplasma marginale type IV secretion system effector proteins. by Svetlana Lockwood, Daniel E Voth, Kelly A Brayton, Paul A Beare, Wendy C Brown, Robert A Heinzen, Shira L Broschat

    Published 2011-01-01
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