Deep texture representation analysis for histopathological images by Ranny Rahaningrum Herdiantoputri, Daisuke Komura, Kei Fujisaka, Tohru Ikeda, Shumpei Ishikawa

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SegRep: Mask-Supervised Learning for Segment Representation in Pathology Images by Chichun Yang, Daisuke Komura, Mieko Ochi, Miwako Kakiuchi, Hiroto Katoh, Tetsuo Ushiku, Shumpei Ishikawa

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Functional genomics screen with pooled shRNA library and gene expression profiling with extracts of Azadirachta indica identify potential pathways for therapeutic targets in head a... by Neeraja M. Krishnan, Hiroto Katoh, Vinayak Palve, Manisha Pareek, Reiko Sato, Shumpei Ishikawa, Binay Panda

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1027 scTCR/RNA-Seq identifiy two exhausted T cell subsets in neoantigen-specific CD8+ T cells by Yukari Kobayashi, Kazuhiro Kakimi, Koji Nagaoka, Shumpei Ishikawa, Tomoko Saito, Kazuyoshi Takeda, Hiroto Katoh, Yoshikazu Totsuka

Predicting lymph node recurrence in cT1‐2N0 tongue squamous cell carcinoma: collaboration between artificial intelligence and pathologists by Masahiro Adachi, Tetsuro Taki, Motohiro Kojima, Naoya Sakamoto, Kazuto Matsuura, Ryuichi Hayashi, Keiji Tabuchi, Shumpei Ishikawa, Genichiro Ishii, Shingo Sakashita

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Registered multi-device/staining histology image dataset for domain-agnostic machine learning models by Mieko Ochi, Daisuke Komura, Takumi Onoyama, Koki Shinbo, Haruya Endo, Hiroto Odaka, Miwako Kakiuchi, Hiroto Katoh, Tetsuo Ushiku, Shumpei Ishikawa

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Stomach encyclopedia: Combined single-cell and spatial transcriptomics reveal cell diversity and homeostatic regulation of human stomach by Ayumu Tsubosaka, Daisuke Komura, Miwako Kakiuchi, Hiroto Katoh, Takumi Onoyama, Asami Yamamoto, Hiroyuki Abe, Yasuyuki Seto, Tetsuo Ushiku, Shumpei Ishikawa

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Extracting interpretable features for pathologists using weakly supervised learning to predict p16 expression in oropharyngeal cancer by Masahiro Adachi, Tetsuro Taki, Naoya Sakamoto, Motohiro Kojima, Akihiko Hirao, Kazuto Matsuura, Ryuichi Hayashi, Keiji Tabuchi, Shumpei Ishikawa, Genichiro Ishii, Shingo Sakashita

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SpatialKNifeY (SKNY): Extending from spatial domain to surrounding area to identify microenvironment features with single-cell spatial omics data. by Shunsuke A Sakai, Ryosuke Nomura, Satoi Nagasawa, SungGi Chi, Ayako Suzuki, Yutaka Suzuki, Mitsuho Imai, Yoshiaki Nakamura, Takayuki Yoshino, Shumpei Ishikawa, Katsuya Tsuchihara, Shun-Ichiro Kageyama, Riu Yamashita

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Genetic analysis of foramen magnum meningiomas reveals AKT1 mutations uncomplicated by TRAF7 mutations by Yudai Hirano, Satoru Miyawaki, Yu Sakai, Yu Teranishi, Atsushi Okano, Motoyuki Umekawa, Hiroki Hongo, Seiei Torazawa, Shotaro Ogawa, Daisuke Komura, Hiroto Katoh, Masako Ikemura, Tetsuo Ushiku, Shumpei Ishikawa, Nobuhito Saito

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Clinical significance of NF2 alteration in grade I meningiomas revisited; prognostic impact integrated with extent of resection, tumour location, and Ki-67 index by Yu Teranishi, Atsushi Okano, Satoru Miyawaki, Kenta Ohara, Daiichiro Ishigami, Hiroki Hongo, Shogo Dofuku, Hirokazu Takami, Jun Mitsui, Masako Ikemura, Daisuke Komura, Hiroto Katoh, Tetsuo Ushiku, Shumpei Ishikawa, Masahiro Shin, Hirofumi Nakatomi, Nobuhito Saito

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Meningiomas in patients with neurofibromatosis type 2 predominantly comprise ‘immunogenic subtype’ tumours characterised by macrophage infiltration by Yu Teranishi, Satoru Miyawaki, Masahiro Nakatochi, Atsushi Okano, Kenta Ohara, Hiroki Hongo, Daiichiro Ishigami, Yu Sakai, Daisuke Shimada, Shunsaku Takayanagi, Masako Ikemura, Daisuke Komura, Hiroto Katoh, Jun Mitsui, Shinichi Morishita, Tetsuo Ushiku, Shumpei Ishikawa, Hirofumi Nakatomi, Nobuhito Saito

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High expression of olfactomedin-4 is correlated with chemoresistance and poor prognosis in pancreatic cancer. by Ryotaro Ohkuma, Erica Yada, Shumpei Ishikawa, Daisuke Komura, Hidenobu Ishizaki, Koji Tamada, Yutaro Kubota, Kazuyuki Hamada, Hiroo Ishida, Yuya Hirasawa, Hirotsugu Ariizumi, Etsuko Satoh, Midori Shida, Makoto Watanabe, Rie Onoue, Kiyohiro Ando, Junji Tsurutani, Kiyoshi Yoshimura, Takehiko Yokobori, Tetsuro Sasada, Takeshi Aoki, Masahiko Murakami, Tomoko Norose, Nobuyuki Ohike, Masafumi Takimoto, Masahiko Izumizaki, Shinichi Kobayashi, Takuya Tsunoda, Satoshi Wada

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