DLoopCaller: A deep learning approach for predicting genome-wide chromatin loops by integrating accessible chromatin landscapes. by Siguo Wang, Qinhu Zhang, Ying He, Zhen Cui, Zhenghao Guo, Kyungsook Han, De-Shuang Huang

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Predicting transcription factor binding sites using DNA shape features based on shared hybrid deep learning architecture by Siguo Wang, Qinhu Zhang, Zhen Shen, Ying He, Zhen-Heng Chen, Jianqiang Li, De-Shuang Huang

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Base-resolution prediction of transcription factor binding signals by a deep learning framework. by Qinhu Zhang, Ying He, Siguo Wang, Zhanheng Chen, Zhenhao Guo, Zhen Cui, Qi Liu, De-Shuang Huang

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scInterpreter: a knowledge-regularized generative model for interpretably integrating scRNA-seq data by Zhen-Hao Guo, Yan Wu, Siguo Wang, Qinhu Zhang, Jin-Ming Shi, Yan-Bin Wang, Zhan-Heng Chen

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