Comprehensive mouse microbiota genome catalog reveals major difference to its human counterpart. by Silas Kieser, Evgeny M Zdobnov, Mirko Trajkovski

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ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data by Silas Kieser, Joseph Brown, Evgeny M. Zdobnov, Mirko Trajkovski, Lee Ann McCue

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Informed interpretation of metagenomic data by StrainPhlAn enables strain retention analyses of the upper airway microbiome by Nadja Mostacci, Tsering Monika Wüthrich, Léa Siegwald, Silas Kieser, Ruth Steinberg, Olga Sakwinska, Philipp Latzin, Insa Korten, Markus Hilty

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Antibiotic Treatment Leads to Fecal Escherichia coli and Coliphage Expansion in Severely Malnourished Diarrhea Patients by Silas Kieser, Shafiqul A. Sarker, Bernard Berger, Shamima Sultana, Mohammod J. Chisti, Shoeb B. Islam, Francis Foata, Nadine Porta, Bertrand Betrisey, Coralie Fournier, Patrick Descombes, Annick Mercenier, Olga Sakwinska, Harald Brüssow

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An orally active carbon monoxide-releasing molecule enhances beneficial gut microbial species to combat obesity in mice by Djamal Eddine Benrahla, Shruti Mohan, Matija Trickovic, Florence Anne Castelli, Ghida Alloul, Arielle Sobngwi, Rosa Abdiche, Silas Kieser, Vanessa Demontant, Elisabeth Trawinski, Céline Chollet, Christophe Rodriguez, Hiroaki Kitagishi, François Fenaille, Mirko Trajkovski, Roberto Motterlini, Roberta Foresti

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