Genomic and Epidemiological Analysis of SARS-CoV-2 Viruses in Sri Lanka. by Jeewandara, C, Jayathilaka, D, Ranasinghe, D, Hsu, NS, Ariyaratne, D, Jayadas, TT, Panambara Arachchige, DM, Lindsey, BB, Gomes, L, Parker, MD, Wijewickrama, A, Karunaratne, M, Ogg, GS, de Silva, TI, Malavige, GN

Diagnosis of SARS-CoV-2 infection with LamPORE, a high-throughput platform combining loop-mediated isothermal amplification and nanopore sequencing by Peto, L, Rodger, G, Carter, DP, Osman, KL, Yavuz, M, Johnson, K, Raza, M, Parker, MD, Wyles, MD, Andersson, M, Justice, A, Vaughan, A, Hoosdally, S, Stoesser, N, Matthews, PC, Eyre, DW, Peto, TEA, Carroll, MW, de Silva, TI, Crook, DW, Evans, CM, Pullan, ST

The impact of viral mutations on recognition by SARS-CoV-2 specific T-cells by de Silva, TI, Liu, G, Lindsey, BB, Dong, D, Moore, SC, Hsu, NS, Shah, D, Wellington, D, Mentzer, AJ, Angyal, A, Brown, R, Parker, MD, Ying, Z, Yao, X, Turtle, L, Dunachie, S, Maini, MK, Ogg, G, Knight, JC, Peng, Y, Rowland-Jones, SL, Dong, T

Poor antibody responses to SARS-CoV-2 infection or vaccination are associated with high re-infection rates in haemodialysis and renal transplant patients by Shankar, S, Beckett, J, Tipton, T, Ogbe, A, Kasanyinga, M, Dold, C, Lumley, S, Dengu, F, Rompianesi, G, Elgilani, F, Longet, S, Deeks, A, Payne, RP, Duncan, CJA, Richter, AG, Silva, TI, Turtle, L, Bull, K, Barnardo, M, Dunachie, S, Hester, J, Friend, P, Issa, F, Barnes, E, Carroll, MW, Klenerman, P

SARS-CoV-2-specific T cell responses are not associated with protection against reinfection in hemodialysis patients by Shankar, S, Beckett, J, Tipton, T, Ogbe, A, Kasanyinga, M, Dold, C, Lumley, S, Dengu, F, Rompianesi, G, Elgilani, F, Longet, S, Deeks, A, Payne, RP, Duncan, CJA, Richter, A, de Silva, TI, Turtle, L, Bull, K, Barnardo, M, Friend, PJ, Dunachie, SJ, Hester, J, Issa, F, Barnes, E, Carroll, MW, Klenerman, P

Co-infections, secondary infections, and antimicrobial use in patients hospitalised with COVID-19 during the first pandemic wave from the ISARIC WHO CCP-UK study: a multicentre, pr... by Russell, CD, Fairfield, CJ, Drake, TM, Turtle, L, Seaton, RA, Wootton, DG, Sigfrid, L, Harrison, EM, Docherty, AB, de Silva, TI, Egan, C, Pius, R, Hardwick, HE, Merson, L, Girvan, M, Dunning, J, Nguyen-Van-Tam, JS, Openshaw, PJM, Baillie, JK, Semple, MG, Ho, A, ISARIC4C investigators, Horby, PW

Characterisation of in-hospital complications associated with COVID-19 using the ISARIC WHO Clinical Characterisation Protocol UK: a prospective, multicentre cohort study. by Drake, TM, Riad, AM, Fairfield, CJ, Egan, C, Knight, SR, Pius, R, Hardwick, HE, Norman, L, Shaw, CA, McLean, KA, Thompson, AAR, Ho, A, Swann, OV, Sullivan, M, Soares, F, Holden, KA, Merson, L, Plotkin, D, Sigfrid, L, de Silva, TI, Girvan, M, Jackson, C, Russell, CD, Dunning, J, Solomon, T, Carson, G, Olliaro, P, Nguyen-Van-Tam, JS, Turtle, L, Docherty, AB, Openshaw, PJ, Baillie, JK, Harrison, EM, Semple, MG

A delicate balance between antibody evasion and ACE2 affinity for Omicron BA.2.75 by Huo, J, Dijokaite-Guraliuc, A, Liu, C, Zhou, D, Ginn, HM, Das, R, Supasa, P, Selvaraj, M, Nutalai, R, Tuekprakhon, A, Duyvesteyn, HME, Mentzer, AJ, Skelly, D, Ritter, TG, Amini, A, Bibi, S, Adele, S, Johnson, SA, Paterson, NG, Williams, MA, Hall, DR, Plowright, M, Newman, TAH, Hornsby, H, de Silva, TI, Temperton, N, Klenerman, P, Barnes, E, Dunachie, SJ, Pollard, AJ, Lambe, T, Goulder, P, OPTIC consortium, ISARIC4C consortium, Fry, EE, Mongkolsapaya, J, Ren, J, Stuart, DI, Screaton, GR

Omicron infection following vaccination enhances a broad spectrum of immune responses dependent on infection history by Hornsby, H, Nicols, AR, Longet, S, Liu, C, Tomic, A, Angyal, A, Kronsteiner, B, Tyerman, JK, Tipton, T, Zhang, P, Gallis, M, Supasa, P, Selvaraj, M, Abraham, P, Neale, I, Ali, M, Barratt, NA, Nell, JM, Gustafsson, L, Strickland, S, Grouneva, I, Rostron, T, Moore, SC, Hering, LM, Dobson, SL, Bibi, S, Mongkolsapaya, J, Lambe, T, Wootton, D, Hall, V, Hopkins, S, Dong, T, Barnes, E, Screaton, G, Richter, A, Turtle, L, Rowland-Jones, SL, Carroll, M, Duncan, CJA, Klenerman, P, Dunachie, SJ, Payne, RP, de Silva, TI

SARS-CoV-2-specific nasal IgA wanes 9 months after hospitalisation with COVID-19 and is not induced by subsequent vaccination by Liew, F, Talwar, S, Cross, A, Willett, BJ, Scott, S, Logan, N, Siggins, MK, Swieboda, D, Sidhu, JK, Efstathiou, C, Moore, SC, Davis, C, Mohamed, N, Nunag, J, King, C, Thompson, AAR, Rowland-Jones, SL, Docherty, AB, Chalmers, JD, Ho, L-P, Horsley, A, Raman, B, Poinasamy, K, Marks, M, Kon, OM, Howard, L, Wootton, DG, Dunachie, S, Quint, JK, Evans, RA, Wain, LV, Fontanella, S, de Silva, TI, Ho, A, Harrison, E, Baillie, JK, Semple, MG, Brightling, C, Thwaites, RS, Turtle, L, Openshaw, PJM

T-cell and antibody responses to first BNT162b2 vaccine dose in previously infected and SARS-CoV-2-naive UK health-care workers: a multicentre prospective cohort study by Angyal, A, Longet, S, Moore, SC, Payne, RP, Harding, A, Tipton, T, Rongkard, P, Ali, M, Hering, LM, Meardon, N, Austin, J, Brown, R, Skelly, D, Gillson, N, Dobson, SL, Cross, A, Sandhar, G, Kilby, JA, Tyerman, JK, Nicols, AR, Spegarova, JS, Mehta, H, Hornsby, H, Whitham, R, Conlon, CP, Jeffery, K, Goulder, P, Frater, J, Dold, C, Pace, M, Ogbe, A, Brown, H, Ansari, MA, Adland, E, Brown, A, Chand, M, Shields, A, Matthews, PC, Hopkins, S, Hall, V, James, W, Rowland-Jones, SL, Klenerman, P, Dunachie, S, Richter, A, Duncan, CJA, Barnes, E, Carroll, M, Turtle, L, de Silva, TI

Immunogenicity of standard and extended dosing intervals of BNT162b2 mRNA vaccine by Payne, RP, Longet, S, Austin, JA, Skelly, DT, Dejnirattisai, W, Adele, S, Meardon, N, Faustini, S, Al-Taei, S, Moore, SC, Tipton, T, Hering, LM, Angyal, A, Brown, R, Nicols, AR, Gillson, N, Dobson, SL, Amini, A, Supasa, P, Cross, A, Bridges-Webb, A, Reyes, LS, Linder, A, Sandhar, G, Kilby, JA, Tyerman, JK, Altmann, T, Hornsby, H, Whitham, R, Phillips, E, Malone, T, Hargreaves, A, Shields, A, Saei, A, Foulkes, S, Stafford, L, Johnson, S, Wootton, DG, Conlon, CP, Jeffery, K, Matthews, PC, Frater, J, Deeks, AS, Pollard, AJ, Brown, A, Rowland-Jones, SL, Mongkolsapaya, J, Barnes, E, Hopkins, S, Hall, V, Dold, C, Duncan, CJA, Richter, A, Carroll, M, Screaton, G, de Silva, TI, Turtle, L, Klenerman, P, Dunachie, S