Sex-Differential Gene Expression in Developing Human Cortex and Its Intersection With Autism Risk Pathways Autor Lee T. Kissel, Sirisha Pochareddy, Joon-Yong An, Nenad Sestan, Stephan J. Sanders, Xuran Wang, Donna M. Werling

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Homeostatic plasticity fails at the intersection of autism-gene mutations and a novel class of common genetic modifiers Autor Özgür Genç, Joon-Yong An, Richard D Fetter, Yelena Kulik, Giulia Zunino, Stephan J Sanders, Graeme W Davis

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Constructing and optimizing 3D atlases from 2D data with application to the developing mouse brain Autor David M Young, Siavash Fazel Darbandi, Grace Schwartz, Zachary Bonzell, Deniz Yuruk, Mai Nojima, Laurent C Gole, John LR Rubenstein, Weimiao Yu, Stephan J Sanders

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Building a Precision Medicine Delivery Platform for Clinics: The University of California, San Francisco, BRIDGE Experience Autor Riley Bove, Erica Schleimer, Paul Sukhanov, Michael Gilson, Sindy M Law, Andrew Barnecut, Bruce L Miller, Stephen L Hauser, Stephan J Sanders, Katherine P Rankin

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Detection of subtle white matter lesions in MRI through texture feature extraction and boundary delineation using an embedded clustering strategy Autor Kokhaur Ong, David M. Young, Sarina Sulaiman, Siti Mariyam Shamsuddin, Norzaini Rose Mohd Zain, Hilwati Hashim, Kahhay Yuen, Stephan J. Sanders, Weimiao Yu, Seepheng Hang

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Enhancing Clinical Information Display to Improve Patient Encounters: Human-Centered Design and Evaluation of the Parkinson Disease-BRIDGE Platform Autor Ethan G Brown, Erica Schleimer, Ian O Bledsoe, William Rowles, Nicolette A Miller, Stephan J Sanders, Katherine P Rankin, Jill L Ostrem, Caroline M Tanner, Riley Bove

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Five autism-associated transcriptional regulators target shared loci proximal to brain-expressed genes Autor Siavash Fazel Darbandi, Joon-Yong An, Kenneth Lim, Nicholas F. Page, Lindsay Liang, David M. Young, Athena R. Ypsilanti, Matthew W. State, Alex S. Nord, Stephan J. Sanders, John L.R. Rubenstein

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Integrated model of de novo and inherited genetic variants yields greater power to identify risk genes. Autor Xin He, Stephan J Sanders, Li Liu, Silvia De Rubeis, Elaine T Lim, James S Sutcliffe, Gerard D Schellenberg, Richard A Gibbs, Mark J Daly, Joseph D Buxbaum, Matthew W State, Bernie Devlin, Kathryn Roeder

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High-throughput characterization of the role of non-B DNA motifs on promoter function Autor Ilias Georgakopoulos-Soares, Jesus Victorino, Guillermo E. Parada, Vikram Agarwal, Jingjing Zhao, Hei Yuen Wong, Mubarak Ishaq Umar, Orry Elor, Allan Muhwezi, Joon-Yong An, Stephan J. Sanders, Chun Kit Kwok, Fumitaka Inoue, Martin Hemberg, Nadav Ahituv

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Multiplex, single-cell CRISPRa screening for cell type specific regulatory elements Autor Florence M. Chardon, Troy A. McDiarmid, Nicholas F. Page, Riza M. Daza, Beth K. Martin, Silvia Domcke, Samuel G. Regalado, Jean-Benoît Lalanne, Diego Calderon, Xiaoyi Li, Lea M. Starita, Stephan J. Sanders, Nadav Ahituv, Jay Shendure

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A Cre-dependent massively parallel reporter assay allows for cell-type specific assessment of the functional effects of non-coding elements in vivo Autor Tomas Lagunas, Stephen P. Plassmeyer, Anthony D. Fischer, Ryan Z. Friedman, Michael A. Rieger, Din Selmanovic, Simona Sarafinovska, Yvette K. Sol, Michael J. Kasper, Stuart B. Fass, Alessandra F. Aguilar Lucero, Joon-Yong An, Stephan J. Sanders, Barak A. Cohen, Joseph D. Dougherty

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No evidence for association of autism with rare heterozygous point mutations in Contactin-Associated Protein-Like 2 (CNTNAP2), or in Other Contactin-Associated Proteins or Contacti... Autor John D Murdoch, Abha R Gupta, Stephan J Sanders, Michael F Walker, John Keaney, Thomas V Fernandez, Michael T Murtha, Samuel Anyanwu, Gordon T Ober, Melanie J Raubeson, Nicholas M DiLullo, Natalie Villa, Zainabdul Waqar, Catherine Sullivan, Luis Gonzalez, A Jeremy Willsey, So-Yeon Choe, Benjamin M Neale, Mark J Daly, Matthew W State

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The female protective effect against autism spectrum disorder Autor Emilie M. Wigdor, Daniel J. Weiner, Jakob Grove, Jack M. Fu, Wesley K. Thompson, Caitlin E. Carey, Nikolas Baya, Celia van der Merwe, Raymond K. Walters, F. Kyle Satterstrom, Duncan S. Palmer, Anders Rosengren, Jonas Bybjerg-Grauholm, David M. Hougaard, Preben Bo Mortensen, Mark J. Daly, Michael E. Talkowski, Stephan J. Sanders, Somer L. Bishop, Anders D. Børglum, Elise B. Robinson

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LARP1 haploinsufficiency is associated with an autosomal dominant neurodevelopmental disorder Autor James Chettle, Raymond J. Louie, Olivia Larner, Robert Best, Kevin Chen, Josephine Morris, Zinaida Dedeic, Anna Childers, R. Curtis Rogers, Barbara R. DuPont, Cindy Skinner, Sébastien Küry, Kevin Uguen, Marc Planes, Danielle Monteil, Megan Li, Aviva Eliyahu, Lior Greenbaum, Nofar Mor, Thomas Besnard, Bertrand Isidor, Benjamin Cogné, Alyssa Blesson, Anne Comi, Ingrid M. Wentzensen, Blake Vuocolo, Seema R. Lalani, Roberta Sierra, Lori Berry, Kent Carter, Stephan J. Sanders, Sarah P. Blagden

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Whole-Genome and RNA Sequencing Reveal Variation and Transcriptomic Coordination in the Developing Human Prefrontal Cortex Autor Donna M. Werling, Sirisha Pochareddy, Jinmyung Choi, Joon-Yong An, Brooke Sheppard, Minshi Peng, Zhen Li, Claudia Dastmalchi, Gabriel Santpere, André M.M. Sousa, Andrew T.N. Tebbenkamp, Navjot Kaur, Forrest O. Gulden, Michael S. Breen, Lindsay Liang, Michael C. Gilson, Xuefang Zhao, Shan Dong, Lambertus Klei, A. Ercument Cicek, Joseph D. Buxbaum, Homa Adle-Biassette, Jean-Leon Thomas, Kimberly A. Aldinger, Diana R. O’Day, Ian A. Glass, Noah A. Zaitlen, Michael E. Talkowski, Kathryn Roeder, Matthew W. State, Bernie Devlin, Stephan J. Sanders, Nenad Sestan

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De Novo Insertions and Deletions of Predominantly Paternal Origin Are Associated with Autism Spectrum Disorder Autor Shan Dong, Michael F. Walker, Nicholas J. Carriero, Michael DiCola, A. Jeremy Willsey, Adam Y. Ye, Zainulabedin Waqar, Luis E. Gonzalez, John D. Overton, Stephanie Frahm, John F. Keaney, III, Nicole A. Teran, Jeanselle Dea, Jeffrey D. Mandell, Vanessa Hus Bal, Catherine A. Sullivan, Nicholas M. DiLullo, Rehab O. Khalil, Jake Gockley, Zafer Yuksel, Sinem M. Sertel, A. Gulhan Ercan-Sencicek, Abha R. Gupta, Shrikant M. Mane, Michael Sheldon, Andrew I. Brooks, Kathryn Roeder, Bernie Devlin, Matthew W. State, Liping Wei, Stephan J. Sanders

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A comprehensive AI model development framework for consistent Gleason grading Autor Xinmi Huo, Kok Haur Ong, Kah Weng Lau, Laurent Gole, David M. Young, Char Loo Tan, Xiaohui Zhu, Chongchong Zhang, Yonghui Zhang, Longjie Li, Hao Han, Haoda Lu, Jing Zhang, Jun Hou, Huanfen Zhao, Hualei Gan, Lijuan Yin, Xingxing Wang, Xiaoyue Chen, Hong Lv, Haotian Cao, Xiaozhen Yu, Yabin Shi, Ziling Huang, Gabriel Marini, Jun Xu, Bingxian Liu, Bingxian Chen, Qiang Wang, Kun Gui, Wenzhao Shi, Yingying Sun, Wanyuan Chen, Dalong Cao, Stephan J. Sanders, Hwee Kuan Lee, Susan Swee-Shan Hue, Weimiao Yu, Soo Yong Tan

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