RLE plots: Visualizing unwanted variation in high dimensional data. by Luke C Gandolfo, Terence P Speed

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Finding a suitable library size to call variants in RNA-Seq by Anna Quaglieri, Christoffer Flensburg, Terence P. Speed, Ian J. Majewski

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Maps of variability in cell lineage trees. by Damien G Hicks, Terence P Speed, Mohammed Yassin, Sarah M Russell

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Establishing the Link between X-Chromosome Aberrations and <i>TP53</i> Status, with Breast Cancer Patient Outcomes by Franco Caramia, Terence P. Speed, Hui Shen, Ygal Haupt, Sue Haupt

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Unifying gene expression measures from multiple platforms using factor analysis. by Xin Victoria Wang, Roel G W Verhaak, Elizabeth Purdom, Paul T Spellman, Terence P Speed

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Removing unwanted variation with CytofRUV to integrate multiple CyTOF datasets by Marie Trussart, Charis E Teh, Tania Tan, Lawrence Leong, Daniel HD Gray, Terence P Speed

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A quartet of PIF bHLH factors provides a transcriptionally centered signaling hub that regulates seedling morphogenesis through differential expression-patterning of shared target... by Yu Zhang, Oleg Mayba, Anne Pfeiffer, Hui Shi, James M Tepperman, Terence P Speed, Peter H Quail

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A statistical framework for analyzing deep mutational scanning data by Alan F. Rubin, Hannah Gelman, Nathan Lucas, Sandra M. Bajjalieh, Anthony T. Papenfuss, Terence P. Speed, Douglas M. Fowler

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Correction to: A statistical framework for analyzing deep mutational scanning data by Alan F. Rubin, Hannah Gelman, Nathan Lucas, Sandra M. Bajjalieh, Anthony T. Papenfuss, Terence P. Speed, Douglas M. Fowler

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Genome-wide analysis of glucocorticoid receptor binding regions in adipocytes reveal gene network involved in triglyceride homeostasis. by Chi-Yi Yu, Oleg Mayba, Joyce V Lee, Joanna Tran, Charlie Harris, Terence P Speed, Jen-Chywan Wang

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A high force of plasmodium vivax blood-stage infection drives the rapid acquisition of immunity in papua new guinean children. by Cristian Koepfli, Kathryn L Colborn, Benson Kiniboro, Enmoore Lin, Terence P Speed, Peter M Siba, Ingrid Felger, Ivo Mueller

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Identification of cancer sex-disparity in the functional integrity of p53 and its X chromosome network by Sue Haupt, Franco Caramia, Alan Herschtal, Thierry Soussi, Guillermina Lozano, Hu Chen, Han Liang, Terence P. Speed, Ygal Haupt

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Investigating and correcting plasma DNA sequencing coverage bias to enhance aneuploidy discovery. by Dineika Chandrananda, Natalie P Thorne, Devika Ganesamoorthy, Damien L Bruno, Yuval Benjamini, Terence P Speed, Howard R Slater, Melanie Bahlo

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scClassify: sample size estimation and multiscale classification of cells using single and multiple reference by Yingxin Lin, Yue Cao, Hani Jieun Kim, Agus Salim, Terence P Speed, David M Lin, Pengyi Yang, Jean Yee Hwa Yang

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Identification of candidate growth promoting genes in ovarian cancer through integrated copy number and expression analysis. by Manasa Ramakrishna, Louise H Williams, Samantha E Boyle, Jennifer L Bearfoot, Anita Sridhar, Terence P Speed, Kylie L Gorringe, Ian G Campbell

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Correction: Identification of Candidate Growth Promoting Genes in Ovarian Cancer through Integrated Copy Number and Expression Analysis. by Manasa Ramakrishna, Louise H. Williams, Samantha E. Boyle, Jennifer L. Bearfoot, Anita Sridhar, Terence P. Speed, Kylie L. Gorringe, Ian G. Campbell

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Changes in ferrous iron and glutathione promote ferroptosis and frailty in aging Caenorhabditis elegans by Nicole L Jenkins, Simon A James, Agus Salim, Fransisca Sumardy, Terence P Speed, Marcus Conrad, Des R Richardson, Ashley I Bush, Gawain McColl

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Peripheral immune cell abundance differences link blood mitochondrial DNA copy number and Parkinson’s disease by Longfei Wang, Jiru Han, Liam G. Fearnley, Michael Milton, Haloom Rafehi, Joshua Reid, Zachary F. Gerring, Shashank Masaldan, Tali Lang, Terence P. Speed, Melanie Bahlo

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Subcompartmentalisation of proteins in the rhoptries correlates with ordered events of erythrocyte invasion by the blood stage malaria parasite. by Elizabeth S Zuccala, Alexander M Gout, Chaitali Dekiwadia, Danushka S Marapana, Fiona Angrisano, Lynne Turnbull, David T Riglar, Kelly L Rogers, Cynthia B Whitchurch, Stuart A Ralph, Terence P Speed, Jake Baum

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Estrogenic plant extracts reverse weight gain and fat accumulation without causing mammary gland or uterine proliferation. by Elise F Saunier, Omar I Vivar, Andrea Rubenstein, Xiaoyue Zhao, Moshe Olshansky, Scott Baggett, Richard E Staub, Mary Tagliaferri, Isaac Cohen, Terence P Speed, John D Baxter, Dale C Leitman

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