CytoConverter: a web-based tool to convert karyotypes to genomic coordinates by Janet Wang, Thomas LaFramboise

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Metagenomic markings of myeloid malignancies by An Dinh Duy Nguyen, Maryssa Shanteau-Jackson, Thomas LaFramboise

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Detection and quantification of mitochondrial DNA deletions from next-generation sequence data by Colleen M. Bosworth, Sneha Grandhi, Meetha P. Gould, Thomas LaFramboise

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The applications of massive parallel sequencing (next-generation sequencing) in research and molecular diagnosis of human genetic diseases by Hieu T. Nguyen, Huong T.T. Le, Liem T. Nguyen, Hua Lou, Thomas LaFramboise

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Allelic selection of amplicons in glioblastoma revealed by combining somatic and germline analysis. by Thomas LaFramboise, Ninad Dewal, Katherine Wilkins, Itsik Pe'er, Matthew L Freedman

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Correction: PCR-Free Enrichment of Mitochondrial DNA from Human Blood and Cell Lines for High Quality Next-Generation DNA Sequencing. by Meetha P Gould, Colleen M Bosworth, Sarah McMahon, Sneha Grandhi, Brian T Grimberg, Thomas LaFramboise

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PCR-Free Enrichment of Mitochondrial DNA from Human Blood and Cell Lines for High Quality Next-Generation DNA Sequencing. by Meetha P Gould, Colleen M Bosworth, Sarah McMahon, Sneha Grandhi, Brian T Grimberg, Thomas LaFramboise

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The DNMT1-associated lincRNA DACOR1 reprograms genome-wide DNA methylation in colon cancer by Saigopal Somasundaram, Megan E Forrest, Helen Moinova, Allison Cohen, Vinay Varadan, Thomas LaFramboise, Sanford Markowitz, Ahmad M Khalil

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Allele-specific amplification in cancer revealed by SNP array analysis. by Thomas LaFramboise, Barbara A Weir, Xiaojun Zhao, Rameen Beroukhim, Cheng Li, David Harrington, William R Sellers, Matthew Meyerson

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Colon Cancer-Upregulated Long Non-Coding RNA lincDUSP Regulates Cell Cycle Genes and Potentiates Resistance to Apoptosis by Megan E. Forrest, Alina Saiakhova, Lydia Beard, David A. Buchner, Peter C. Scacheri, Thomas LaFramboise, Sanford Markowitz, Ahmad M. Khalil

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Exonic variants undergoing allele-specific selection in cancers by Qiyuan Li, Yuanyuan Zeng, Janet Wang, Hongkun Fang, Jintao Guo, Liying Yu, Taoling Zhong, Chaoqun Xu, Matthew Freedman, Thomas LaFramboise

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Characterizing mutational heterogeneity in a glioblastoma patient with double recurrence. by Gabrielle C Nickel, Jill Barnholtz-Sloan, Meetha P Gould, Sarah McMahon, Andrea Cohen, Mark D Adams, Kishore Guda, Mark Cohen, Andrew E Sloan, Thomas LaFramboise

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Induced pluripotent stem cells derived from patients carrying mitochondrial mutations exhibit altered bioenergetics and aberrant differentiation potential by Fibi Meshrkey, Kelly M. Scheulin, Christopher M. Littlejohn, Joshua Stabach, Bibhuti Saikia, Vedant Thorat, Yimin Huang, Thomas LaFramboise, Edward J. Lesnefsky, Raj R. Rao, Franklin D. West, Shilpa Iyer

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Molecular features of early onset adult myelodysplastic syndrome by Cassandra M. Hirsch, Bartlomiej P. Przychodzen, Tomas Radivoyevitch, Bhumika Patel, Swapna Thota, Michael J. Clemente, Yasunobu Nagata, Thomas LaFramboise, Hetty E. Carraway, Aziz Nazha, Mikkael A. Sekeres, Hideki Makishima, Jaroslaw P. Maciejewski

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Eltrombopag inhibits TET dioxygenase to contribute to hematopoietic stem cell expansion in aplastic anemia by Yihong Guan, Metis Hasipek, Dongxu Jiang, Anand D. Tiwari, Dale R. Grabowski, Simona Pagliuca, Sunisa Kongkiatkamon, Bhumika Patel, Salendra Singh, Yvonne Parker, Thomas LaFramboise, Daniel Lindner, Mikkael A. Sekeres, Omar Y. Mian, Yogen Saunthararajah, Jaroslaw P. Maciejewski, Babal K. Jha

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Pathophysiologic and clinical implications of molecular profiles resultant from deletion 5q by Vera Adema, Laura Palomo, Wencke Walter, Mar Mallo, Stephan Hutter, Thomas La Framboise, Leonor Arenillas, Manja Meggendorfer, Tomas Radivoyevitch, Blanca Xicoy, Andrea Pellagatti, Claudia Haferlach, Jacqueline Boultwood, Wolfgang Kern, Valeria Visconte, Mikkael Sekeres, John Barnard, Torsten Haferlach, Francesc Solé, Jaroslaw P. Maciejewski

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Clinical and basic implications of dynamic T cell receptor clonotyping in hematopoietic cell transplantation by Simona Pagliuca, Carmelo Gurnari, Sanghee Hong, Ran Zhao, Sunisa Kongkiatkamon, Laila Terkawi, Misam Zawit, Yihong Guan, Hassan Awada, Ashwin Kishtagari, Cassandra M. Kerr, Thomas LaFramboise, Bhumika J. Patel, Babal K. Jha, Hetty E. Carraway, Valeria Visconte, Navneet S. Majhail, Betty K. Hamilton, Jaroslaw P. Maciejewski

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Invariant patterns of clonal succession determine specific clinical features of myelodysplastic syndromes by Yasunobu Nagata, Hideki Makishima, Cassandra M. Kerr, Bartlomiej P. Przychodzen, Mai Aly, Abhinav Goyal, Hassan Awada, Mohammad Fahad Asad, Teodora Kuzmanovic, Hiromichi Suzuki, Tetsuichi Yoshizato, Kenichi Yoshida, Kenichi Chiba, Hiroko Tanaka, Yuichi Shiraishi, Satoru Miyano, Sudipto Mukherjee, Thomas LaFramboise, Aziz Nazha, Mikkael A. Sekeres, Tomas Radivoyevitch, Torsten Haferlach, Seishi Ogawa, Jaroslaw P. Maciejewski

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Adaptation to chronic ER stress enforces pancreatic β-cell plasticity by Chien-Wen Chen, Bo-Jhih Guan, Mohammed R. Alzahrani, Zhaofeng Gao, Long Gao, Syrena Bracey, Jing Wu, Cheikh A. Mbow, Raul Jobava, Leena Haataja, Ajay H. Zalavadia, Ashleigh E. Schaffer, Hugo Lee, Thomas LaFramboise, Ilya Bederman, Peter Arvan, Clayton E. Mathews, Ivan C. Gerling, Klaus H. Kaestner, Boaz Tirosh, Feyza Engin, Maria Hatzoglou

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Oncogenic PIK3CA mutations reprogram glutamine metabolism in colorectal cancer by Yujun Hao, Yardena Samuels, Qingling Li, Dawid Krokowski, Bo-Jhih Guan, Chao Wang, Zhicheng Jin, Bohan Dong, Bo Cao, Xiujing Feng, Min Xiang, Claire Xu, Stephen Fink, Neal J. Meropol, Yan Xu, Ronald A. Conlon, Sanford Markowitz, Kenneth W. Kinzler, Victor E. Velculescu, Henri Brunengraber, Joseph E. Willis, Thomas LaFramboise, Maria Hatzoglou, Guo-Fang Zhang, Bert Vogelstein, Zhenghe Wang

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