Showing 1 - 20 results of 32 for search 'Timothy D Read', 查询时间: 0.03s Refine Results
  1. 1
    Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes

    Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes 由 Robert A. Petit, Timothy D. Read

    出版 2020-08-01
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  2. 2
    Staphylococcus aureus viewed from the perspective of 40,000+ genomes

    Staphylococcus aureus viewed from the perspective of 40,000+ genomes 由 Robert A. Petit III, Timothy D. Read

    出版 2018-07-01
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  3. 3
    The role of hypermutation and collateral sensitivity in antimicrobial resistance diversity of Pseudomonas aeruginosa populations in cystic fibrosis lung infection

    The role of hypermutation and collateral sensitivity in antimicrobial resistance diversity of Pseudomonas aeruginosa populations in cystic fibrosis lung infection 由 Jelly Vanderwoude, Sheyda Azimi, Timothy D. Read, Stephen P. Diggle

    出版 2024-02-01
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  4. 4
    Detecting patterns of accessory genome coevolution in Staphylococcus aureus using data from thousands of genomes

    Detecting patterns of accessory genome coevolution in Staphylococcus aureus using data from thousands of genomes 由 Rohan S Mehta, Robert A Petit, Timothy D Read, Daniel B Weissman

    出版 2023-06-01
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  5. 5
    Development of an Amplicon Nanopore Sequencing Strategy for Detection of Mutations Conferring Intermediate Resistance to Vancomycin in Staphylococcus aureus Strains

    Development of an Amplicon Nanopore Sequencing Strategy for Detection of Mutations Conferring Intermediate Resistance to Vancomycin in Staphylococcus aureus Strains 由 Abraham G. Moller, Robert A. Petit, Michelle H. Davis, Timothy D. Read

    出版 2023-02-01
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  6. 6
    Chlamydia suis undergoes interclade recombination promoting Tet-island exchange

    Chlamydia suis undergoes interclade recombination promoting Tet-island exchange 由 Helena Seth-Smith, Sankhya Bommana, Deborah Dean, Timothy D. Read, Hanna Marti

    出版 2024-07-01
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  7. 7
    Average nucleotide identity-based Staphylococcus aureus strain grouping allows identification of strain-specific genes in the pangenome

    Average nucleotide identity-based Staphylococcus aureus strain grouping allows identification of strain-specific genes in the pangenome 由 Vishnu Raghuram, Robert A. Petit, Zach Karol, Rohan Mehta, Daniel B. Weissman, Timothy D. Read

    出版 2024-07-01
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  8. 8
    Metagenomic Shotgun Sequencing of Endocervical, Vaginal, and Rectal Samples among Fijian Women with and without Chlamydia trachomatis Reveals Disparate Microbial Populations and Function across Anatomic Sites: a Pilot Study

    Metagenomic Shotgun Sequencing of Endocervical, Vaginal, and Rectal Samples among Fijian Women with and without Chlamydia trachomatis Reveals Disparate Microbial Populations and Fu... 由 Sankhya Bommana, Gracie Richards, Mike Kama, Reshma Kodimerla, Kenan Jijakli, Timothy D. Read, Deborah Dean

    出版 2022-06-01
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  9. 9
    Effect of genetic background on the evolution of Vancomycin-Intermediate Staphylococcus aureus (VISA)

    Effect of genetic background on the evolution of Vancomycin-Intermediate Staphylococcus aureus (VISA) 由 Michelle Su, Michelle H. Davis, Jessica Peterson, Claudia Solis-Lemus, Sarah W. Satola, Timothy D. Read

    出版 2021-07-01
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  10. 10
    Fine-scale differentiation between Bacillus anthracis and Bacillus cereus group signatures in metagenome shotgun data

    Fine-scale differentiation between Bacillus anthracis and Bacillus cereus group signatures in metagenome shotgun data 由 Robert A. Petit III, James M. Hogan, Matthew N. Ezewudo, Sandeep J. Joseph, Timothy D. Read

    出版 2018-08-01
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  11. 11
    The single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data

    The single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data 由 Sandeep J. Joseph, Ben Li, Robert A. Petit III, Zhaohui S. Qin, Lyndsey Darrow, Timothy D. Read

    出版 2016-10-01
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  12. 12
    Genotypic and Phenotypic Diversity of <named-content content-type="genus-species">Staphylococcus aureus</named-content> Isolates from Cystic Fibrosis Patient Lung Infections and Their Interactions with <named-content content-type="genus-species">Pseudomonas aeruginosa</named-content>

    Genotypic and Phenotypic Diversity of <named-content content-type="genus-species">Staphylococcus aureus</named-content> Isolates from Cystic Fibrosis Patient Lung Infections and Th... 由 Eryn E. Bernardy, Robert A. Petit, Vishnu Raghuram, Ashley M. Alexander, Timothy D. Read, Joanna B. Goldberg

    出版 2020-06-01
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  13. 13
    Unique microbial diversity, community composition, and networks among Pacific Islander endocervical and vaginal microbiomes with and without Chlamydia trachomatis infection in Fiji

    Unique microbial diversity, community composition, and networks among Pacific Islander endocervical and vaginal microbiomes with and without Chlamydia trachomatis infection in Fiji 由 Sankhya Bommana, Yi-Juan Hu, Mike Kama, Ruohong Wang, Reshma Kodimerla, Kenan Jijakli, Timothy D. Read, Deborah Dean

    出版 2024-01-01
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  14. 14
    Strand-specific RNA-seq reveals ordered patterns of sense and antisense transcription in Bacillus anthracis.

    Strand-specific RNA-seq reveals ordered patterns of sense and antisense transcription in Bacillus anthracis. 由 Karla D Passalacqua, Anjana Varadarajan, Charlotte Weist, Brian D Ondov, Benjamin Byrd, Timothy D Read, Nicholas H Bergman

    出版 2012-01-01
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  15. 15
    Factors associated with foreign body infection in methicillin-resistant Staphylococcus aureus bacteremia

    Factors associated with foreign body infection in methicillin-resistant Staphylococcus aureus bacteremia 由 Kevin Bouiller, Kevin Bouiller, Natasia F. Jacko, Margot J. Shumaker, Brooke M. Talbot, Timothy D. Read, Michael Z. David

    出版 2024-02-01
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  16. 16
    Transcriptional activation of ompA in Neisseria gonorrhoeae mediated by the XRE family member protein NceR

    Transcriptional activation of ompA in Neisseria gonorrhoeae mediated by the XRE family member protein NceR 由 Concerta L. Holley, Vijaya Dhulipala, Stavaros A. Maurakis, Ashley Nicole Greenawalt, Timothy D. Read, Cynthia N. Cornelissen, William M. Shafer

    出版 2023-08-01
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  17. 17
    Shiftwork, functional bowel symptoms, and the microbiome

    Shiftwork, functional bowel symptoms, and the microbiome 由 Ann E. Rogers, Yi-Juan Hu, Ye Yue, Emily F. Wissel, Robert A. Petit III, Simone Jarrett, Jennifer Christie, Timothy D. Read

    出版 2021-05-01
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  18. 18
    Hypervirulent <named-content content-type="genus-species">Chlamydia trachomatis</named-content> Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L<sub>2</sub>) and D Lineages

    Hypervirulent <named-content content-type="genus-species">Chlamydia trachomatis</named-content> Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L<sub>2</sub>) an... 由 Naraporn Somboonna, Raymond Wan, David M. Ojcius, Matthew A. Pettengill, Sandeep J. Joseph, Alexander Chang, Ray Hsu, Timothy D. Read, Deborah Dean

    出版 2011-07-01
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  19. 19
    Genomic analysis of variability in Delta-toxin levels between Staphylococcus aureus strains

    Genomic analysis of variability in Delta-toxin levels between Staphylococcus aureus strains 由 Michelle Su, James T. Lyles, Robert A. Petit III, Jessica Peterson, Michelle Hargita, Huaqiao Tang, Claudia Solis-Lemus, Cassandra L. Quave, Timothy D. Read

    出版 2020-03-01
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  20. 20
    Genomic insights into the evolution of secondary metabolism of Escovopsis and its allies, specialized fungal symbionts of fungus-farming ants

    Genomic insights into the evolution of secondary metabolism of Escovopsis and its allies, specialized fungal symbionts of fungus-farming ants 由 Aileen Berasategui, Hassan Salem, Abraham G. Moller, Yuliana Christopher, Quimi Vidaurre Montoya, Caitlin Conn, Timothy D. Read, Andre Rodrigues, Nadine Ziemert, Nicole Gerardo

    出版 2024-07-01
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