A Central Role for Long Non-coding RNA in Cancer by Sheetal A Mitra, Sheetal A Mitra, Anirban P Mitra, Anirban P Mitra, Timothy J Triche, Timothy J Triche, Timothy J Triche

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Arkas: Rapid reproducible RNAseq analysis [version 2; referees: 2 approved] by Anthony R. Colombo, Timothy J. Triche Jr, Giridharan Ramsingh

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Dysregulated heparan sulfate proteoglycan metabolism promotes Ewing sarcoma tumor growth by Elena Vasileva, Mikako Warren, Timothy J Triche, James F Amatruda

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Experimental comparison and evaluation of the Affymetrix exon and U133Plus2 GeneChip arrays. by Diana Abdueva, Michele R Wing, Betty Schaub, Timothy J Triche

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Potential methylation-regulated genes and pathways in hepatocellular neoplasm, not otherwise specified by Shengmei Zhou, Shengmei Zhou, Meng Li, Dejerianne Ostrow, David Ruble, Leo Mascarenhas, Leo Mascarenhas, Bruce Pawel, Bruce Pawel, Jonathan David Buckley, Jonathan David Buckley, Timothy J. Triche, Timothy J. Triche

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FOXM1 is an oncogenic mediator in Ewing Sarcoma. by Laura Christensen, Jay Joo, Sean Lee, Daniel Wai, Timothy J Triche, William A May

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Suppression of Transposable Elements in Leukemic Stem Cells by Anthony R. Colombo, Asif Zubair, Devi Thiagarajan, Sergey Nuzhdin, Timothy J. Triche, Giridharan Ramsingh

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Profiling targetable immune checkpoints in osteosarcoma by Troy A McEachron, Timothy J Triche, Laurie Sorenson, David M Parham, John D Carpten

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Emerging variants of concern in SARS-CoV-2 membrane protein: a highly conserved target with potential pathological and therapeutic implications by Lishuang Shen, Jennifer Dien Bard, Timothy J. Triche, Alexander R. Judkins, Jaclyn A. Biegel, Xiaowu Gai

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Rapidly emerging SARS-CoV-2 B.1.1.7 sub-lineage in the United States of America with spike protein D178H and membrane protein V70L mutations by Lishuang Shen, Jennifer Dien Bard, Timothy J. Triche, Alexander R. Judkins, Jaclyn A. Biegel, Xiaowu Gai

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A B-cell developmental gene regulatory network is activated in infant AML. by Hamid Bolouri, Rhonda Ries, Laura Pardo, Tiffany Hylkema, Wanding Zhou, Jenny L Smith, Amanda Leonti, Michael Loken, Jason E Farrar, Timothy J Triche, Soheil Meshinchi

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A B-cell developmental gene regulatory network is activated in infant AML by Hamid Bolouri, Rhonda Ries, Laura Pardo, Tiffany Hylkema, Wanding Zhou, Jenny L. Smith, Amanda Leonti, Michael Loken, Jason E. Farrar, Timothy J. Triche, Soheil Meshinchi

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Genomic ‘dark matter’ in prostate cancer: exploring the clinical utility of non-exonic ncRNA as biomarkers by Ismael A Vergara, Nicholas eErho, Timothy J Triche, Mercedeh eGhadessi, Anamaria eCrisan, Thomas eSierocinski, Peter C Black, Christine eBuerki, Elai eDavicioni

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Integrated DNA Copy Number and Expression Profiling Identifies IGF1R as a Prognostic Biomarker in Pediatric Osteosarcoma by Aaron M. Taylor, Jiayi M. Sun, Alexander Yu, Horatiu Voicu, Jianhe Shen, Donald A. Barkauskas, Timothy J. Triche, Julie M. Gastier-Foster, Tsz-Kwong Man, Ching C. Lau

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Epigenetic reprogramming and re-differentiation of a Ewing sarcoma cell line by Joseph Brady Moore IV, Joseph Brady Moore IV, David M Loeb, Kyung U. Hong, Poul H Sorensen, Timothy J Triche, David W Lee, Michael eBarbato, Michael eBarbato, Robert John Arceci, Robert John Arceci

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Persistence of SARS CoV-2 S1 Protein in CD16+ Monocytes in Post-Acute Sequelae of COVID-19 (PASC) up to 15 Months Post-Infection by Bruce K. Patterson, Edgar B. Francisco, Ram Yogendra, Emily Long, Amruta Pise, Hallison Rodrigues, Eric Hall, Monica Herrera, Purvi Parikh, Jose Guevara-Coto, Jose Guevara-Coto, Timothy J. Triche, Paul Scott, Saboor Hekmati, Dennis Maglinte, Xaiolan Chang, Rodrigo A. Mora-Rodríguez, Javier Mora

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Mithramycin induces promoter reprogramming and differentiation of rhabdoid tumor by Maggie H Chasse, Benjamin K Johnson, Elissa A Boguslawski, Katie M Sorensen, Jessica E Rosien, Min H Kang, C Patrick Reynolds, Lyong Heo, Zachary B Madaj, Ian Beddows, Gabrielle E Foxa, Susan M Kitchen‐Goosen, Bart O Williams, Timothy J Triche Jr, Patrick J Grohar

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Discovery and validation of a prostate cancer genomic classifier that predicts early metastasis following radical prostatectomy. by Nicholas Erho, Anamaria Crisan, Ismael A Vergara, Anirban P Mitra, Mercedeh Ghadessi, Christine Buerki, Eric J Bergstralh, Thomas Kollmeyer, Stephanie Fink, Zaid Haddad, Benedikt Zimmermann, Thomas Sierocinski, Karla V Ballman, Timothy J Triche, Peter C Black, R Jeffrey Karnes, George Klee, Elai Davicioni, Robert B Jenkins

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A multicenter, randomized study of decitabine as epigenetic priming with induction chemotherapy in children with AML by Lia Gore, Timothy J. Triche, Jason E. Farrar, Daniel Wai, Christophe Legendre, Gerald C. Gooden, Winnie S. Liang, John Carpten, David Lee, Frank Alvaro, Margaret E. Macy, Carola Arndt, Philip Barnette, Todd Cooper, Laura Martin, Aru Narendran, Jessica Pollard, Soheil Meshinchi, Jessica Boklan, Robert J. Arceci, Bodour Salhia

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Ten quick tips for deep learning in biology. by Benjamin D Lee, Anthony Gitter, Casey S Greene, Sebastian Raschka, Finlay Maguire, Alexander J Titus, Michael D Kessler, Alexandra J Lee, Marc G Chevrette, Paul Allen Stewart, Thiago Britto-Borges, Evan M Cofer, Kun-Hsing Yu, Juan Jose Carmona, Elana J Fertig, Alexandr A Kalinin, Brandon Signal, Benjamin J Lengerich, Timothy J Triche, Simina M Boca

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