An optimized FM-index library for nucleotide and amino acid search by Tim Anderson, Travis J. Wheeler

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Mirage2's high-quality spliced protein-to-genome mappings produce accurate multiple-sequence alignments of isoforms. by Alexander J Nord, Travis J Wheeler

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Transposable element subfamily annotation has a reproducibility problem by Kaitlin M. Carey, Gilia Patterson, Travis J. Wheeler

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The Dfam community resource of transposable element families, sequence models, and genome annotations by Jessica Storer, Robert Hubley, Jeb Rosen, Travis J. Wheeler, Arian F. Smit

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TE Hub: A community-oriented space for sharing and connecting tools, data, resources, and methods for transposable element annotation by The TE Hub Consortium, Tyler A. Elliott, Tony Heitkam, Robert Hubley, Hadi Quesneville, Alexander Suh, Travis J. Wheeler

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Framework of the <em>Alu</em> Subfamily Evolution in the Platyrrhine Three-Family Clade of Cebidae, Callithrichidae, and Aotidae by Jessica M. Storer, Jerilyn A. Walker, Jasmine N. Baker, Shifat Hossain, Christian Roos, Travis J. Wheeler, Mark A. Batzer

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Drugsniffer: An Open Source Workflow for Virtually Screening Billions of Molecules for Binding Affinity to Protein Targets by Vishwesh Venkatraman, Thomas H. Colligan, George T. Lesica, Daniel R. Olson, Jeremiah Gaiser, Conner J. Copeland, Travis J. Wheeler, Amitava Roy, Amitava Roy

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Pf Bacteriophage and Their Impact on Pseudomonas Virulence, Mammalian Immunity, and Chronic Infections by Patrick R. Secor, Patrick R. Secor, Patrick R. Secor, Elizabeth B. Burgener, Elizabeth B. Burgener, M. Kinnersley, Laura K. Jennings, Laura K. Jennings, Valery Roman-Cruz, Valery Roman-Cruz, Medeea Popescu, Jonas D. Van Belleghem, Naomi Haddock, Conner Copeland, Lia A. Michaels, Christiaan R. de Vries, Qingquan Chen, Julie Pourtois, Travis J. Wheeler, Travis J. Wheeler, Carlos E. Milla, Paul L. Bollyky

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