Global Distribution of Carbohydrate Utilization Potential in the Prokaryotic Tree of Life by Rubén López-Mondéjar, Vojtěch Tláskal, Ulisses Nunes da Rocha, Petr Baldrian

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Enrichment of Anaerobic Microbial Communities from Midgut and Hindgut of Sun Beetle Larvae (<i>Pachnoda marginata</i>) on Wheat Straw: Effect of Inoculum Preparation by Bruna Grosch Schroeder, Washington Logroño, Ulisses Nunes da Rocha, Hauke Harms, Marcell Nikolausz

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Whole-genome sequence of the filamentous diazotrophic cyanobacterium Tolypothrix sp. PCC 7712 and its comparison with non-diazotrophic Tolypothrix sp. PCC 7601 by Mahir Bozan, Denny Popp, Rene Kallies, Ulisses Nunes da Rocha, Stephan Klähn, Katja Bühler

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The rhizosphere selects for particular groups of acidobacteria and verrucomicrobia. by Ulisses Nunes da Rocha, Caroline M Plugge, Isabelle George, Jan Dirk van Elsas, Leonard Simon van Overbeek

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Mining Synergistic Microbial Interactions: A Roadmap on How to Integrate Multi-Omics Data by Joao Pedro Saraiva, Anja Worrich, Canan Karakoç, Rene Kallies, Antonis Chatzinotas, Florian Centler, Ulisses Nunes da Rocha

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Evaluation of Sequencing Library Preparation Protocols for Viral Metagenomic Analysis from Pristine Aquifer Groundwaters by René Kallies, Martin Hölzer, Rodolfo Brizola Toscan, Ulisses Nunes da Rocha, John Anders, Manja Marz, Antonis Chatzinotas

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Electrochemical and Microbial Dissection of Electrified Biotrickling Filters by Benjamin Korth, Narcís Pous, Richard Hönig, Philip Haus, Felipe Borim Corrêa, Ulisses Nunes da Rocha, Sebastià Puig, Falk Harnisch

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PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning by Lummy Maria Oliveira Monteiro, João Pedro Saraiva, Rodolfo Brizola Toscan, Peter F. Stadler, Rafael Silva-Rocha, Ulisses Nunes da Rocha

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Machine learning-assisted identification of bioindicators predicts medium-chain carboxylate production performance of an anaerobic mixed culture by Bin Liu, Heike Sträuber, João Saraiva, Hauke Harms, Sandra Godinho Silva, Jonas Coelho Kasmanas, Sabine Kleinsteuber, Ulisses Nunes da Rocha

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Exploring the Potential Molecular Mechanisms of Interactions between a Probiotic Consortium and Its Coral Host by Phillipe M. Rosado, Pedro M. Cardoso, João G. Rosado, Júnia Schultz, Ulisses Nunes da Rocha, Tina Keller-Costa, Raquel S. Peixoto

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Combining Flow Cytometry and Metagenomics Improves Recovery of Metagenome-Assembled Genomes in a Cell Culture from Activated Sludge by Nafi’u Abdulkadir, Joao Pedro Saraiva, Florian Schattenberg, Rodolfo Brizola Toscan, Felipe Borim Correa, Hauke Harms, Susann Müller, Ulisses Nunes da Rocha

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Polyphasic Analysis Reveals Potential Petroleum Hydrocarbon Degradation and Biosurfactant Production by Rare Biosphere Thermophilic Bacteria From Deception Island, an Active Antarc... by Júnia Schultz, Júnia Schultz, Isabella Campelo Vilardi Argentino, René Kallies, Ulisses Nunes da Rocha, Alexandre Soares Rosado, Alexandre Soares Rosado, Alexandre Soares Rosado

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Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in mos... by Stefanía Magnúsdóttir, Joao Pedro Saraiva, Alexander Bartholomäus, Majid Soheili, Rodolfo Brizola Toscan, Junya Zhang, Junya Zhang, Ulisses Nunes da Rocha, CLUE-TERRA consortium

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Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome by Tina Keller-Costa, Lydia Kozma, Sandra G. Silva, Rodolfo Toscan, Jorge Gonçalves, Asunción Lago-Lestón, Nikos C. Kyrpides, Ulisses Nunes da Rocha, Rodrigo Costa

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Information Theory for Biological Sequence Classification: A Novel Feature Extraction Technique Based on Tsallis Entropy by Robson P. Bonidia, Anderson P. Avila Santos, Breno L. S. de Almeida, Peter F. Stadler, Ulisses Nunes da Rocha, Danilo S. Sanches, André C. P. L. F. de Carvalho

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Successional Trajectories of Rhizosphere Bacterial Communities over Consecutive Seasons by Shengjing Shi, Erin Nuccio, Donald J. Herman, Ruud Rijkers, Katerina Estera, Jiabao Li, Ulisses Nunes da Rocha, Zhili He, Jennifer Pett-Ridge, Eoin L. Brodie, Jizhong Zhou, Mary Firestone

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The fate of sulfonamide resistance genes and anthropogenic pollution marker intI1 after discharge of wastewater into a pristine river stream by Sarah Haenelt, Gangan Wang, Jonas Coelho Kasmanas, Florin Musat, Florin Musat, Hans Hermann Richnow, Hans Hermann Richnow, Ulisses Nunes da Rocha, Jochen A. Müller, Jochen A. Müller, Niculina Musat

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Corrigendum: The fate of sulfonamide resistance genes and anthropogenic pollution marker intI1 after discharge of wastewater into a pristine river stream by Sarah Haenelt, Gangan Wang, Jonas Coelho Kasmanas, Florin Musat, Florin Musat, Hans Hermann Richnow, Hans Hermann Richnow, Ulisses Nunes da Rocha, Jochen A. Müller, Jochen A. Müller, Niculina Musat

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Microbial community drivers of PK/NRP gene diversity in selected global soils by Chiara Borsetto, Gregory C. A. Amos, Ulisses Nunes da Rocha, Alex L. Mitchell, Robert D. Finn, Rabah Forar Laidi, Carlos Vallin, David A. Pearce, Kevin K. Newsham, Elizabeth M. H. Wellington

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Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent <i>Bacillus velezensis</i> B.BV10 by Rosiana Bertê, Gustavo Manoel Teixeira, João Paulo de Oliveira, Maria Luiza Abreu Nicoletto, Daniel Vieira da Silva, Guilherme Gonçalves de Godoy, Danilo Sipoli Sanches, Juliano Tadeu Vilela de Resende, Ulisses de Padua Pereira, Ulisses Nunes da Rocha, Admilton Gonçalves de Oliveira

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