The origins of specialization: insights from bacteria held 25 years in captivity. by Vaughn S Cooper

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Experimental Evolution as a High-Throughput Screen for Genetic Adaptations by Vaughn S. Cooper

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Susceptibility of Caenorhabditis elegans to Burkholderia infection depends on prior diet and secreted bacterial attractants. by Vaughn S Cooper, Wendy A Carlson, John J Lipuma

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Periodic Variation of Mutation Rates in Bacterial Genomes Associated with Replication Timing by Marcus M. Dillon, Way Sung, Michael Lynch, Vaughn S. Cooper

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Mutations leading to ceftolozane/tazobactam and imipenem/cilastatin/relebactam resistance during in vivo exposure to ceftazidime/avibactam in Pseudomonas aeruginosa by Glenn J. Rapsinski, Alecia B. Rokes, Daria Van Tyne, Vaughn S. Cooper

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Why genes evolve faster on secondary chromosomes in bacteria. by Vaughn S Cooper, Samuel H Vohr, Sarah C Wrocklage, Philip J Hatcher

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EvolvingSTEM: a microbial evolution-in-action curriculum that enhances learning of evolutionary biology and biotechnology by Vaughn S. Cooper, Taylor M. Warren, Abigail M. Matela, Michael Handwork, Shani Scarponi

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The environment affects epistatic interactions to alter the topology of an empirical fitness landscape. by Kenneth M Flynn, Tim F Cooper, Francisco B-G Moore, Vaughn S Cooper

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There and back again: consequences of biofilm specialization under selection for dispersal by Devon eO'Rourke, Cody E Fitzgerald, Charles C Traverse, Vaughn S Cooper

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Comparative genomics of Burkholderia multivorans, a ubiquitous pathogen with a highly conserved genomic structure. by Charlotte Peeters, Vaughn S Cooper, Philip J Hatcher, Bart Verheyde, Aurélien Carlier, Peter Vandamme

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Parallel Evolution of Tobramycin Resistance across Species and Environments by Michelle R. Scribner, Alfonso Santos-Lopez, Christopher W. Marshall, Christopher Deitrick, Vaughn S. Cooper

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NADH Dehydrogenases in Pseudomonas aeruginosa Growth and Virulence by Angela Torres, Naomi Kasturiarachi, Matthew DuPont, Vaughn S. Cooper, Jennifer Bomberger, Anna Zemke

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Evolutionary pathways to antibiotic resistance are dependent upon environmental structure and bacterial lifestyle by Alfonso Santos-Lopez, Christopher W Marshall, Michelle R Scribner, Daniel J Snyder, Vaughn S Cooper

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Expression of myeloid Src-family kinases is associated with poor prognosis in AML and influences Flt3-ITD kinase inhibitor acquired resistance. by Ravi K Patel, Mark C Weir, Kexin Shen, Daniel Snyder, Vaughn S Cooper, Thomas E Smithgall

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The roles of history, chance, and natural selection in the evolution of antibiotic resistance by Alfonso Santos-Lopez, Christopher W Marshall, Allison L Haas, Caroline Turner, Javier Rasero, Vaughn S Cooper

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Mapping of Influenza Virus RNA-RNA Interactions Reveals a Flexible Network by Valerie Le Sage, Jack P. Kanarek, Dan J. Snyder, Vaughn S. Cooper, Seema S. Lakdawala, Nara Lee

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Quantitative mapping of mRNA 3' ends in Pseudomonas aeruginosa reveals a pervasive role for premature 3' end formation in response to azithromycin. by Salini Konikkat, Michelle R Scribner, Rory Eutsey, N Luisa Hiller, Vaughn S Cooper, Joel McManus

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Genetic characterization of clinical and environmental <i>Vibrio parahaemolyticus</i> from the Northeast USA reveals emerging resident and non-indigenous pathogen linea... by Feng eXu, Feng eXu, Feng eXu, Saba eIlyas, Jeffrey A. Hall, Jeffrey A. Hall, Stephen H. Jones, Stephen H. Jones, Vaughn S. Cooper, Vaughn S. Cooper, Cheryl A. Whistler, Cheryl A. Whistler

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Evolution of the Insertion-Deletion Mutation Rate Across the Tree of Life by Way Sung, Matthew S. Ackerman, Marcus M. Dillon, Thomas G. Platt, Clay Fuqua, Vaughn S. Cooper, Michael Lynch

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Adaptation to Overflow Metabolism by Mutations That Impair tRNA Modification in Experimentally Evolved Bacteria by Marc J. Muraski, Emil M. Nilsson, Melissa J. Fritz, Anthony R. Richardson, Rebecca W. Alexander, Vaughn S. Cooper

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