TETyper: a bioinformatic pipeline for classifying variation and genetic contexts of transposable elements from short-read whole-genome sequencing data by Sheppard, A, Stoesser, N, German-Mesner, I, Vegesana, K, Walker, A, Crook, D, Mathers, A

Don't overlook the little guy: An evaluation of the frequency of small plasmids co-conjugating with larger carbapenemase gene containing plasmids by Barry, K, Wailan, A, Sheppard, A, Crook, D, Vegesana, K, Stoesser, N, Parikh, H, Sebra, R, Mathers, A

Klebsiella quasipneumoniae provides a window into carbapenemase gene transfer, plasmid rearrangements, and patient interactions with the hospital environment by Mathers, AJ, Crook, D, Vaughan, A, Barry, KE, Vegesana, K, Stoesser, N, Parikh, HI, Sebra, R, Kotay, S, Walker, AS, Sheppard, A

Risk factors associated with carbapenemase-producing enterobacterales (CPE) positivity in the hospital wastewater environment by Park, SC, Parikh, H, Vegesana, K, Stoesser, N, Barry, KE, Kotay, SM, Dudley, S, Peto, TEA, Crook, DW, Walker, AS, Mathers, AJ

Klebsiella quasipneumoniae provides a window into carbapenemase gene transfer, plasmid rearrangements, and patient interactions with the hospital environment by Mathers, AJ, Crook, D, Vaughan, A, Barry, KE, Vegesana, K, Stoesser, N, Parikh, HI, Sebra, R, Kotay, S, Walker, AS, Sheppard, AE

Intensive care unit wastewater interventions to prevent transmission of multispecies Klebsiella pneumoniae carbapenemase–producing organisms by Mathers, A, Vegesana, K, German Mesner, I, Barry, K, Pannone, A, Baumann, J, Crook, D, Stoesser, N, Kotay, S, Carroll, J, Sifri, C

The role of fosA in challenges with fosfomycin susceptibility testing of multispecies Klebsiella pneumoniae carbapenemase-producing clinical isolates by Elliott, Z, Barry, K, Cox, H, Stoesser, N, Carroll, J, Vegesana, K, Kotay, S, Sheppard, A, Wailan, A, Crook, D, Parikh, H, Mathers, A

Risk factors for Klebsiella pneumoniae carbapenemase (KPC) gene acquisition and clinical outcomes across multiple bacterial species by Mathers, A, Vegesana, K, German Mesner, I, Ainsworth, J, Pannone, A, Crook, D, Sifri, C, Sheppard, A, Stoesser, N, Peto, T, Walker, A, Eyre, D