Showing 1 - 14 results of 14 for search 'Vladimir I. Timofeev', query time: 0.06s Refine Results
  1. 1
    Identification of the Precursor Cluster in the Crystallization Solution of Proteinase K Protein by Molecular Dynamics Methods

    Identification of the Precursor Cluster in the Crystallization Solution of Proteinase K Protein by Molecular Dynamics Methods by Yuliya V. Kordonskaya, Vladimir I. Timofeev, Margarita A. Marchenkova, Petr V. Konarev

    Published 2022-03-01
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  2. 2
    The Role of Cations of the Precipitant in the Interaction of Protein Molecules in the Lysozyme Oligomers in Crystallization Solutions

    The Role of Cations of the Precipitant in the Interaction of Protein Molecules in the Lysozyme Oligomers in Crystallization Solutions by Yuliya V. Kordonskaya, Vladimir I. Timofeev, Yulia A. Dyakova, Margarita A. Marchenkova, Yury V. Pisarevsky, Mikhail V. Kovalchuk

    Published 2021-12-01
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  3. 3
    Free Energy Change during the Formation of Crystalline Contact between Lysozyme Monomers under Different Physical and Chemical Conditions

    Free Energy Change during the Formation of Crystalline Contact between Lysozyme Monomers under Different Physical and Chemical Conditions by Yuliya V. Kordonskaya, Vladimir I. Timofeev, Yulia A. Dyakova, Margarita A. Marchenkova, Yury V. Pisarevsky, Mikhail V. Kovalchuk

    Published 2021-09-01
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  4. 4
    The nature of the ligand's side chain interacting with the S1'-subsite of metallocarboxypeptidase T (from Thermoactinomyces vulgaris) determines the geometry of the tetrahedral transition complex.

    The nature of the ligand's side chain interacting with the S1'-subsite of metallocarboxypeptidase T (from Thermoactinomyces vulgaris) determines the geometry of the tetrahedral tra... by Valery Kh Akparov, Vladimir I Timofeev, Galina E Konstantinova, Ilyas G Khaliullin, Inna P Kuranova, Tatiana V Rakitina, Vytas Švedas

    Published 2019-01-01
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  5. 5
    Unusual Temperature Behavior of Stability of Proteinase K Dimer Formed in Crystallization Solution Defined by Molecular Dynamics

    Unusual Temperature Behavior of Stability of Proteinase K Dimer Formed in Crystallization Solution Defined by Molecular Dynamics by Yuliya V. Kordonskaya, Vladimir I. Timofeev, Yulia A. Dyakova, Margarita A. Marchenkova, Yury V. Pisarevsky, Svetlana Yu. Silvestrova, Mikhail V. Kovalchuk

    Published 2022-11-01
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  6. 6
    How the Hinge Region Affects Interactions between the Catalytic and β-Propeller Domains in Oligopeptidase B

    How the Hinge Region Affects Interactions between the Catalytic and β-Propeller Domains in Oligopeptidase B by Vladimir I. Timofeev, Yury A. Gaponov, Dmitry E. Petrenko, Georgy S. Peters, Yulia K. Agapova, Alena Y. Nikolaeva, Anna G. Mikhailova, Tatiana V. Rakitina

    Published 2023-11-01
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  7. 7
    The Role of Cations and Anions in the Formation of Crystallization Oligomers in Protein Solutions as Revealed by Combination of Small-Angle X-ray Scattering and Molecular Dynamics

    The Role of Cations and Anions in the Formation of Crystallization Oligomers in Protein Solutions as Revealed by Combination of Small-Angle X-ray Scattering and Molecular Dynamics by Margarita A. Marchenkova, Petr V. Konarev, Yuliya V. Kordonskaya, Kseniia B. Ilina, Yury V. Pisarevsky, Alexander V. Soldatov, Vladimir I. Timofeev, Mikhail V. Kovalchuk

    Published 2022-05-01
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  8. 8
    The Crystal Structure of Nα-p-tosyl-lysyl Chloromethylketone-Bound Oligopeptidase B from Serratia Proteamaculans Revealed a New Type of Inhibitor Binding

    The Crystal Structure of Nα-p-tosyl-lysyl Chloromethylketone-Bound Oligopeptidase B from Serratia Proteamaculans Revealed a New Type of Inhibitor Binding by Vladimir I. Timofeev, Dmitry E. Petrenko, Yulia K. Agapova, Anna V. Vlaskina, David M. Karlinsky, Anna G. Mikhailova, Inna P. Kuranova, Tatiana V. Rakitina

    Published 2021-11-01
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  9. 9
    Comparison of histone-like HU protein DNA-binding properties and HU/IHF protein sequence alignment.

    Comparison of histone-like HU protein DNA-binding properties and HU/IHF protein sequence alignment. by Dmitri Kamashev, Yulia Agapova, Sergey Rastorguev, Anna A Talyzina, Konstantin M Boyko, Dmitry A Korzhenevskiy, Anna Vlaskina, Raif Vasilov, Vladimir I Timofeev, Tatiana V Rakitina

    Published 2017-01-01
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  10. 10
    Elucidation of the Conformational Transition of Oligopeptidase B by an Integrative Approach Based on the Combination of X-ray, SAXS, and Essential Dynamics Sampling Simulation

    Elucidation of the Conformational Transition of Oligopeptidase B by an Integrative Approach Based on the Combination of X-ray, SAXS, and Essential Dynamics Sampling Simulation by Vladimir V. Britikov, Vladimir I. Timofeev, Dmitry E. Petrenko, Elena V. Britikova, Alena Y. Nikolaeva, Anna V. Vlaskina, Konstantin M. Boyko, Anna G. Mikhailova, Tatiana V. Rakitina

    Published 2022-05-01
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  11. 11
    First Crystal Structure of Bacterial Oligopeptidase B in an Intermediate State: The Roles of the Hinge Region Modification and Spermine

    First Crystal Structure of Bacterial Oligopeptidase B in an Intermediate State: The Roles of the Hinge Region Modification and Spermine by Dmitry E. Petrenko, Vladimir I. Timofeev, Vladimir V. Britikov, Elena V. Britikova, Sergey Y. Kleymenov, Anna V. Vlaskina, Inna P. Kuranova, Anna G. Mikhailova, Tatiana V. Rakitina

    Published 2021-10-01
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  12. 12
    Study of the Formation of Precursor Clusters in an Aqueous Solution of KH<sub>2</sub>PO<sub>4</sub> by Small-Angle X-ray Scattering and Molecular Dynamics

    Study of the Formation of Precursor Clusters in an Aqueous Solution of KH<sub>2</sub>PO<sub>4</sub> by Small-Angle X-ray Scattering and Molecular Dynamics by Andrey E. Sukhanov, Petr V. Konarev, Vladimir I. Timofeev, Ildar F. Garipov, Ekaterina S. Smirnova, Georgy S. Peters, Kseniia B. Ilina, Yury V. Pisarevsky, Olga A. Alekseeva, Mikhail V. Kovalchuk

    Published 2023-11-01
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  13. 13
    An Algorithm for the Development of a Recombinant Antiherpetic Subunit Vaccine Combining the Crystal Structure Analysis, AlphaFold2-Based Modeling, and Immunoinformatics

    An Algorithm for the Development of a Recombinant Antiherpetic Subunit Vaccine Combining the Crystal Structure Analysis, AlphaFold2-Based Modeling, and Immunoinformatics by Tatiana V. Rakitina, Evgeniya V. Smirnova, David D. Podshivalov, Vladimir I. Timofeev, Aleksandr S. Komolov, Anna V. Vlaskina, Tatiana N. Gaeva, Raif G. Vasilov, Yulia A. Dyakova, Mikhail V. Kovalchuk

    Published 2023-09-01
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  14. 14
    Immunoinformatic Design of a Multivalent Peptide Vaccine Against Mucormycosis: Targeting FTR1 Protein of Major Causative Fungi

    Immunoinformatic Design of a Multivalent Peptide Vaccine Against Mucormycosis: Targeting FTR1 Protein of Major Causative Fungi by Yusha Araf, Yusha Araf, Yusha Araf, Abu Tayab Moin, Abu Tayab Moin, Vladimir I. Timofeev, Nairita Ahsan Faruqui, Nairita Ahsan Faruqui, Syeda Afra Saiara, Nafisa Ahmed, Nafisa Ahmed, Md. Sorwer Alam Parvez, Md. Sorwer Alam Parvez, Tanjim Ishraq Rahaman, Tanjim Ishraq Rahaman, Bishajit Sarkar, Bishajit Sarkar, Md. Asad Ullah, Md. Asad Ullah, Mohammad Jakir Hosen, Chunfu Zheng, Chunfu Zheng

    Published 2022-05-01
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