Viral Genetic Linkage Analysis in the Presence of Missing Data. by Shelley H Liu, Gabriel Erion, Vladimir Novitsky, Victor De Gruttola

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Linkage of viral sequences among HIV-infected village residents in Botswana: estimation of linkage rates in the presence of missing data. by Nicole Bohme Carnegie, Rui Wang, Vladimir Novitsky, Victor De Gruttola

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Viral diversity and diversification of major non-structural genes vif, vpr, vpu, tat exon 1 and rev exon 1 during primary HIV-1 subtype C infection. by Raabya Rossenkhan, Vladimir Novitsky, Theresa K Sebunya, Rosemary Musonda, Berhanu A Gashe, M Essex

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Identifying Recent HIV Infections: From Serological Assays to Genomics by Sikhulile Moyo, Eduan Wilkinson, Vladimir Novitsky, Alain Vandormael, Simani Gaseitsiwe, Max Essex, Susan Engelbrecht, Tulio de Oliveira

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Limited HIV-1 Subtype C <i>nef</i> 3′PPT Variation in Combination Antiretroviral Therapy Naïve and Experienced People Living with HIV in Botswana by Kaelo K. Seatla, Dorcas Maruapula, Wonderful T. Choga, Olorato Morerinyane, Shahin Lockman, Vladimir Novitsky, Ishmael Kasvosve, Sikhulile Moyo, Simani Gaseitsiwe

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Frequent intra-subtype recombination among HIV-1 circulating in Tanzania. by Ireen E Kiwelu, Vladimir Novitsky, Lauren Margolin, Jeannie Baca, Rachel Manongi, Noel Sam, John Shao, Mary F McLane, Saidi H Kapiga, M Essex

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HIV-1 subtypes and recombinants in Northern Tanzania: distribution of viral quasispecies. by Ireen E Kiwelu, Vladimir Novitsky, Lauren Margolin, Jeannie Baca, Rachel Manongi, Noel Sam, John Shao, Mary F McLane, Saidi H Kapiga, M Essex

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HIV-1 pol diversity among female bar and hotel workers in Northern Tanzania. by Ireen E Kiwelu, Vladimir Novitsky, Elimsaada Kituma, Lauren Margolin, Jeannie Baca, Rachel Manongi, Noel Sam, John Shao, Mary F McLane, Saidi H Kapiga, M Essex

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Timing constraints of in vivo gag mutations during primary HIV-1 subtype C infection. by Vladimir Novitsky, Rui Wang, Lauren Margolin, Jeannie Baca, Lemme Kebaabetswe, Raabya Rossenkhan, Caitlin Bonney, Michaela Herzig, David Nkwe, Sikhulile Moyo, Rosemary Musonda, Elias Woldegabriel, Erik van Widenfelt, Joseph Makhema, Stephen Lagakos, M Essex

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Comparison of knowledge of HIV status and treatment coverage between non-citizens and citizens: Botswana Combination Prevention Project (BCPP). by Tafireyi Marukutira, Lisa Block, Mary Grace Alwano, Stephanie Behel, Joseph N Jarvis, Unoda Chakalisa, Kate Powis, Vladimir Novitsky, William Bapati, Huisheng Wang, Faith Ussery, Refeletswe Lebelonyane, Lisa A Mills, Janet Moore, Pamela Bachanas

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Real-Life Feasibility of HIV Drug Resistance Testing Using Dried Filter Analytes in Kenyan Children and Adolescents Living with HIV by Akarsh Manne, Alexander DeLong, Winstone Nyandiko, Allison K. DeLong, Rachel Vreeman, Vladimir Novitsky, Anthony Ngeresa, Edwin Sang, Ashley Chory, Josephine Aluoch, Eslyne Jepkemboi, Millicent Orido, Celestine Ashimosi, Festus Sang, Joseph W. Hogan, Rami Kantor

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Phylogenetic relatedness of circulating HIV-1C variants in Mochudi, Botswana. by Vladimir Novitsky, Hermann Bussmann, Andrew Logan, Sikhulile Moyo, Erik van Widenfelt, Lillian Okui, Mompati Mmalane, Jeannie Baca, Lauren Buck, Eleanor Phillips, David Tim, Mary Fran McLane, Quanhong Lei, Rui Wang, Joseph Makhema, Shahin Lockman, Victor DeGruttola, M Essex

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The role of CYP2B6 516G>T polymorphism on efavirenz/nevirapine toxicity. Implications on treatment outcomes by Monkgomotsi J. Maseng, BSc, Leabaneng Tawe, PhD, Prisca K. Thami, PhD, Sikhulile Moyo, PhD, Ishmael Kasvosve, PhD, Vladimir Novitsky, PhD, Max Essex, PhD, Gianluca Russo, PhD, Simani Gaseitsiwe, PhD, Giacomo M. Paganotti, PhD, Jorddy Neves Cruz.

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Deep-sequence phylogenetics to quantify patterns of HIV transmission in the context of a universal testing and treatment trial – BCPP/Ya Tsie trial by Lerato E Magosi, Yinfeng Zhang, Tanya Golubchik, Victor DeGruttola, Eric Tchetgen Tchetgen, Vladimir Novitsky, Janet Moore, Pam Bachanas, Tebogo Segolodi, Refeletswe Lebelonyane, Molly Pretorius Holme, Sikhulile Moyo, Joseph Makhema, Shahin Lockman, Christophe Fraser, Myron Max Essex, Marc Lipsitch, On behalf of The Botswana Combination Prevention Project and PANGEA consortium

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Immunohaematological reference values for HIV-negative healthy adults in Botswana by Madisa Mine, Sikhulile Moyo, Penny Stevens, Kurt Michael, Vladimir Novitsky, Kgomotso Makhaola, Aida Asmelash, S’khatele Molefhabangwe, Elias Woldegabriel, Gaseboloke Mothowaeng, Talkmore Maruta, Charity Kamhukamwe, Phibeon M. Mangwendeza, Molly Holmes-Pretorius, Isaac Mtoni, Modisa Motswaledi, Rosemary Musonda, Ndwapi Ndwapi, Joseph Makhema, Richard Marlink, Khumo Seipone, Tendani Gaolathe, Max Essex

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HIV-1 subtype C-infected individuals maintaining high viral load as potential targets for the "test-and-treat" approach to reduce HIV transmission. by Vladimir Novitsky, Rui Wang, Hermann Bussmann, Shahin Lockman, Marianna Baum, Roger Shapiro, Ibou Thior, Carolyn Wester, C William Wester, Anthony Ogwu, Aida Asmelash, Rosemary Musonda, Adriana Campa, Sikhulile Moyo, Erik van Widenfelt, Madisa Mine, Claire Moffat, Mompati Mmalane, Joseph Makhema, Richard Marlink, Peter Gilbert, George R Seage, Victor DeGruttola, M Essex

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