Change of positive selection pressure on HIV-1 envelope gene inferred by early and recent samples. by Izumi Yoshida, Wataru Sugiura, Junko Shibata, Fengrong Ren, Ziheng Yang, Hiroshi Tanaka

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Molecular epidemiology of SARS-CoV-2 genome sentinel surveillance in commercial COVID-19 testing sites targeting asymptomatic individuals during Japan’s seventh epidemic wave by Teiichiro Shiino, Junko S. Takeuchi, Hajime Ohyanagi, Moto Kimura, Yukumasa Kazuyama, Masato Ikeda, Wataru Sugiura

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Highly-sensitive allele-specific PCR testing identifies a greater prevalence of transmitted HIV drug resistance in Japan. by Masako Nishizawa, Junko Hattori, Teiichiro Shiino, Tetsuro Matano, Walid Heneine, Jeffrey A Johnson, Wataru Sugiura

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Phylodynamic analysis reveals CRF01_AE dissemination between Japan and neighboring Asian countries and the role of intravenous drug use in transmission. by Teiichiro Shiino, Junko Hattori, Yoshiyuki Yokomaku, Yasumasa Iwatani, Wataru Sugiura, Japanese Drug Resistance HIV-1 Surveillance Network

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Efficacy and Safety of Direct Hemoperfusion Using Polymyxin B-Immobilized Polystyrene Column for Patients With COVID-19: Protocol for an Exploratory Study by Junko Terada-Hirashima, Shinyu Izumi, Daisuke Katagiri, Yukari Uemura, Ayako Mikami, Wataru Sugiura, Shinji Abe, Arata Azuma, Haruhito Sugiyama

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Risk factors for severity on admission and the disease progression during hospitalisation in a large cohort of patients with COVID-19 in Japan by Nobuaki Matsunaga, Norio Ohmagari, Hiroshi Ohtsu, Mari Terada, Sho Saito, Kayoko Hayakawa, Shinya Tsuzuki, Yusuke Asai, Satoshi Kutsuna, Wataru Sugiura

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Association between γ-Glutamyl Transpeptidase and SARS-CoV-2 Spike Antibody Titers among BNT162b2 Vaccine Recipients by Zobida Islam, Shohei Yamamoto, Tetsuya Mizoue, Yusuke Oshiro, Natsumi Inamura, Takeshi Nemoto, Maki Konishi, Mitsuru Ozeki, Wataru Sugiura, Norio Ohmagari

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Association of Impaired Fasting Glucose and Diabetes with SARS-CoV-2 Spike Antibody Titers after the BNT162b2 Vaccine among Health Care Workers in a Tertiary Hospital in Japan by Zobida Islam, Shohei Yamamoto, Tetsuya Mizoue, Akihito Tanaka, Yusuke Oshiro, Natsumi Inamura, Maki Konishi, Mitsuru Ozeki, Wataru Sugiura, Norio Ohmagari

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Deconvoluting the composition of low-frequency hepatitis C viral quasispecies: comparison of genotypes and NS3 resistance-associated variants between HCV/HIV coinfected hemophiliac... by Masato Ogishi, Hiroshi Yotsuyanagi, Takeya Tsutsumi, Hiroyuki Gatanaga, Hirotaka Ode, Wataru Sugiura, Kyoji Moriya, Shinichi Oka, Satoshi Kimura, Kazuhiko Koike

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Protocol of an Exploratory Single-Arm Study to Evaluate the Safety and Immunogenicity of KD-414 as a Booster Vaccine for SARS-CoV-2 in Healthy Adults (KAPIVARA) by Yuriko Terayama, Noriko Tomita, Junko Terada-Hirashima, Yukari Uemura, Yosuke Shimizu, Junko S. Takeuchi, Yuki Takamatsu, Kenji Maeda, Ayako Mikami, Mugen Ujiie, Wataru Sugiura

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HIV-1 drug-resistance surveillance among treatment-experienced and -naïve patients after the implementation of antiretroviral therapy in Ghana. by Nicholas I Nii-Trebi, Shiro Ibe, Jacob S Barnor, Koichi Ishikawa, James A M Brandful, Sampson B Ofori, Shoji Yamaoka, William K Ampofo, Wataru Sugiura

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Efficacy and Safety of the Smallpox Vaccine for Postexposure Prophylaxis in Monkeypox: Protocol for an Open-Labeled, Single-Armed Study by Rina Yano, Junko Terada-Hirashima, Yukari Uemura, Noriko Tomita, Yosuke Shimizu, Haruka Iwasaki, Nobumasa Okumura, Tetsuya Suzuki, Sho Saito, Mugen Ujiie, Wataru Sugiura, Norio Ohmagari

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An open-label, non-randomized study investigating the safety and efficacy of smallpox vaccine, LC16, as post-exposure prophylaxis for mpox by Noriko Tomita, Junko Terada-Hirashima, Yukari Uemura, Yosuke Shimizu, Haruka Iwasaki, Rina Yano, Tetsuya Suzuki, Sho Saito, Nobumasa Okumura, Wataru Sugiura, Norio Ohmagari, Mugen Ujiie

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Validation of the severe COVID-19 prognostic value of serum IL-6, IFN-λ3, CCL17, and calprotectin considering the timing of clinical need for prediction. by Kei Yamamoto, Yusuke Ohsiro, Tetsuya Suzuki, Michiyo Suzuki, Sayaka Miura, Maki Nagashima, Noriko Iwamoto, Junko S Takeuchi, Moto Kimura, Wataru Sugiura, Satoru Nebuya, Masato Kurokawa, Norio Ohmagari

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Validation of the severe COVID-19 prognostic value of serum IL-6, IFN-λ3, CCL17, and calprotectin considering the timing of clinical need for prediction by Kei Yamamoto, Yusuke Ohsiro, Tetsuya Suzuki, Michiyo Suzuki, Sayaka Miura, Maki Nagashima, Noriko Iwamoto, Junko S. Takeuchi, Moto Kimura, Wataru Sugiura, Satoru Nebuya, Masato Kurokawa, Norio Ohmagari

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Compound heterozygous TYK2 mutations underlie primary immunodeficiency with T-cell lymphopenia by Michiko Nemoto, Hiroyoshi Hattori, Naoko Maeda, Nobuhiro Akita, Hideki Muramatsu, Suzuko Moritani, Tomonori Kawasaki, Masami Maejima, Hirotaka Ode, Atsuko Hachiya, Wataru Sugiura, Yoshiyuki Yokomaku, Keizo Horibe, Yasumasa Iwatani

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Omicron BA.1 neutralizing antibody response following Delta breakthrough infection compared with booster vaccination of BNT162b2 by Shohei Yamamoto, Kouki Matsuda, Kenji Maeda, Yusuke Oshiro, Natsumi Inamura, Tetsuya Mizoue, Maki Konishi, Junko S. Takeuchi, Kumi Horii, Mitsuru Ozeki, Haruhito Sugiyama, Hiroaki Mitsuya, Wataru Sugiura, Norio Ohmagari

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Evaluating the Immunogenicity and Safety of a Smallpox Vaccine to Monkeypox in Healthy Japanese Adults: A Single-Arm Study by Noriko Tomita, Eriko Morino, Junko Terada-Hirashima, Yukari Uemura, Yosuke Shimizu, Sho Saito, Tetsuya Suzuki, Nobumasa Okumura, Haruka Iwasaki, Hideki Ebihara, Masayuki Shimojima, Wataru Sugiura, Norio Ohmagari, Mugen Ujiie

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SARS-CoV-2 specific T cell and humoral immune responses upon vaccination with BNT162b2: a 9 months longitudinal study by Junko S. Takeuchi, Ami Fukunaga, Shohei Yamamoto, Akihito Tanaka, Kouki Matsuda, Moto Kimura, Azusa Kamikawa, Yumiko Kito, Kenji Maeda, Gohzoh Ueda, Tetsuya Mizoue, Mugen Ujiie, Hiroaki Mitsuya, Norio Ohmagari, Wataru Sugiura

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Development and customization of a color-coded microbeads-based assay for drug resistance in HIV-1 reverse transcriptase. by Lijun Gu, Ai Kawana-Tachikawa, Teiichiro Shiino, Hitomi Nakamura, Michiko Koga, Tadashi Kikuchi, Eisuke Adachi, Tomohiko Koibuchi, Takaomi Ishida, George F Gao, Masaki Matsushita, Wataru Sugiura, Aikichi Iwamoto, Noriaki Hosoya

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