De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity by Haas, Brian J., Papanicolaou, Alexie, Yassour, Moran, Grabherr, Manfred G., Blood, Philip D., Bowden, Joshua, Couger, Matthew Brian, Eccles, David, Li, Bo, Lieber, Matthias, MacManes, Matthew D., Ott, Michael, Orvis, Joshua, Pochet, Nathalie, Strozzi, Francesco, Weeks, Nathan, Westerman, Rick, William, Thomas, Dewey, Colin N., Henschel, Robert, LeDuc, Richard D., Friedman, Nir, Regev, Aviv

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