Back to the Future for Dermatophyte Genomics by Zeyana S. Rivera, Liliana Losada, William C. Nierman

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The tandem repeats enabling reversible switching between the two phases of β-lactamase substrate spectrum. by Hyojeong Yi, Han Song, Junghyun Hwang, Karan Kim, William C Nierman, Heenam Stanley Kim

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Genomic and phenotypic characterization of Burkholderia isolates from the potable water system of the International Space Station. by Aubrie O'Rourke, Michael D Lee, William C Nierman, R Craig Everroad, Chris L Dupont

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Twelve positions in a β-lactamase that can expand its substrate spectrum with a single amino acid substitution. by Hyojeong Yi, Kwang-Hwi Cho, Yun Sung Cho, Karan Kim, William C Nierman, Heenam Stanley Kim

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The early stage of bacterial genome-reductive evolution in the host. by Han Song, Junghyun Hwang, Hyojeong Yi, Ricky L Ulrich, Yan Yu, William C Nierman, Heenam Stanley Kim

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Genome sequencing and analysis of Yersina pestis KIM D27, an avirulent strain exempt from select agent regulation. by Liliana Losada, John J Varga, Jessica Hostetler, Diana Radune, Maria Kim, Scott Durkin, Olaf Schneewind, William C Nierman

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Gene Expression Profiling and Identification of Resistance Genes to Aspergillus flavus Infection in Peanut through EST and Microarray Strategies by Baozhu Guo, Natalie D. Fedorova, Xiaoping Chen, Chun-Hua Wan, Wei Wang, William C. Nierman, Deepak Bhatnagar, Jiujiang Yu

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Longitudinal changes in the nasopharyngeal resistome of South African infants using shotgun metagenomic sequencing. by Rendani I Manenzhe, Felix S Dube, Meredith Wright, Katie Lennard, Heather J Zar, Stephanie Mounaud, William C Nierman, Mark P Nicol, Clinton Moodley

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Transcriptional regulation of chemical diversity in Aspergillus fumigatus by LaeA. by Robyn M Perrin, Natalie D Fedorova, Jin Woo Bok, Robert A Cramer, Jennifer R Wortman, H Stanley Kim, William C Nierman, Nancy P Keller

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Succession and determinants of the early life nasopharyngeal microbiota in a South African birth cohort by Shantelle Claassen-Weitz, Sugnet Gardner-Lubbe, Yao Xia, Kilaza S. Mwaikono, Stephanie Harris Mounaud, William C. Nierman, Lesley Workman, Heather J. Zar, Mark P. Nicol

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Whole genome comparison of Aspergillus flavus L-morphotype strain NRRL 3357 (type) and S-morphotype strain AF70. by Matthew K Gilbert, Brian M Mack, Geromy G Moore, Darlene L Downey, Matthew D Lebar, Vinita Joardar, Liliana Losada, JiuJiang Yu, William C Nierman, Deepak Bhatnagar

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The temporal dynamics of differential gene expression in Aspergillus fumigatus interacting with human immature dendritic cells in vitro. by Charles O Morton, John J Varga, Anke Hornbach, Markus Mezger, Helga Sennefelder, Susanne Kneitz, Oliver Kurzai, Sven Krappmann, Hermann Einsele, William C Nierman, Thomas R Rogers, Juergen Loeffler

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Characterization of clinically-attenuated Burkholderia mallei by whole genome sequencing: candidate strain for exclusion from Select Agent lists. by Steven E Schutzer, Linda R K Schlater, Catherine M Ronning, David DeShazer, Benjamin J Luft, John J Dunn, Jacques Ravel, Claire M Fraser-Liggett, William C Nierman

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Predicting antimicrobial mechanism-of-action from transcriptomes: A generalizable explainable artificial intelligence approach. by Josh L Espinoza, Chris L Dupont, Aubrie O'Rourke, Sinem Beyhan, Pavel Morales, Amy Spoering, Kirsten J Meyer, Agnes P Chan, Yongwook Choi, William C Nierman, Kim Lewis, Karen E Nelson

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Characterization of Pneumococcal Colonization Dynamics and Antimicrobial Resistance Using Shotgun Metagenomic Sequencing in Intensively Sampled South African Infants by Rendani I. Manenzhe, Felix S. Dube, Felix S. Dube, Meredith Wright, Katie Lennard, Stephanie Mounaud, Stephanie W. Lo, Heather J. Zar, William C. Nierman, Mark P. Nicol, Mark P. Nicol, Clinton Moodley, Clinton Moodley

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Identification and Characterization of an <named-content content-type="genus-species">Aspergillus fumigatus</named-content> “Supermater” Pair by Janyce A. Sugui, Liliana Losada, Wei Wang, John Varga, Popchai Ngamskulrungroj, Mones Abu-Asab, Yun C. Chang, Céline M. O’Gorman, Brian L. Wickes, William C. Nierman, Paul S. Dyer, Kyung J. Kwon-Chung

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Genetic Analysis Using an Isogenic Mating Pair of Aspergillus fumigatus Identifies Azole Resistance Genes and Lack of MAT Locus's Role in Virulence. by Liliana Losada, Janyce A Sugui, Michael A Eckhaus, Yun C Chang, Stephanie Mounaud, Abigail Figat, Vinita Joardar, Suman B Pakala, Suchitra Pakala, Pratap Venepally, Natalie Fedorova, William C Nierman, Kyung J Kwon-Chung

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HacA-independent functions of the ER stress sensor IreA synergize with the canonical UPR to influence virulence traits in Aspergillus fumigatus. by Xizhi Feng, Karthik Krishnan, Daryl L Richie, Vishukumar Aimanianda, Lukas Hartl, Nora Grahl, Margaret V Powers-Fletcher, Minlu Zhang, Kevin K Fuller, William C Nierman, Long Jason Lu, Jean-Paul Latgé, Laura Woollett, Simon L Newman, Robert A Cramer, Judith C Rhodes, David S Askew

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Perturbations in small molecule synthesis uncovers an iron-responsive secondary metabolite network in Aspergillus fumigatus by Philipp eWiemann, Beatrix E. Lechner, Joshua A. Baccile, Joshua A. Baccile, Thomas A. Velk, Wen-Bing eYin, Wen-Bing eYin, Jin Woo eBok, Liliana eLosada, Suman ePakala, William C. Nierman, Frank C. Schroeder, Frank C. Schroeder, Hubertus eHaas, Nancy P. Keller, Nancy P. Keller

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A genomic survey of positive selection in Burkholderia pseudomallei provides insights into the evolution of accidental virulence. by Tannistha Nandi, Catherine Ong, Arvind Pratap Singh, Justin Boddey, Timothy Atkins, Mitali Sarkar-Tyson, Angela E Essex-Lopresti, Hui Hoon Chua, Talima Pearson, Jason F Kreisberg, Christina Nilsson, Pramila Ariyaratne, Catherine Ronning, Liliana Losada, Yijun Ruan, Wing-Kin Sung, Donald Woods, Richard W Titball, Ifor Beacham, Ian Peak, Paul Keim, William C Nierman, Patrick Tan

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