Pareto-optimal phylogenetic tree reconciliation by Libeskind-Hadas, Ran, Wu, Yi-Chieh, Bansal, Mukul S., Kellis, Manolis, Wu, Yi-Chieh

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Deciphering the neural code for retinal ganglion cells through statistical inference by Wu, Yi-Chieh, Ph. D. Massachusetts Institute of Technology

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Evolution at the Subgene Level: Domain Rearrangements in the Drosophila Phylogeny by Wu, Yi-Chieh, Rasmussen, Matthew D., Kellis, Manolis

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Evolution at the Sub-gene Level: Domain Rearrangements in the Drosophila Phylogeny by Wu, Yi-Chieh, Rasmussen, Matthew D., Kellis, Manolis

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Computational evolutionary genomics : phylogenomic models spanning domains, genes, individuals, and species by Wu, Yi-Chieh, Ph. D. Massachusetts Institute of Technology

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Comparative analysis of regulatory information and circuits across distant species by Kheradpour, Pouya, Kundaje, Anshul, Wu, Yi-Chieh, Kellis, Manolis

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A comparative encyclopedia of DNA elements in the mouse genome by Wu, Yi-Chieh, Rasmussen, Matthew D., Bansal, Mukul S., Kellis, Manolis

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Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees by Wu, Yi-Chieh, Bansal, Mukul S., Kellis, Manolis, Rasmussen, Matthew D.

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Improved gene tree error correction in the presence of horizontal gene transfer by Bansal, Mukul S., Wu, Yi-Chieh, Alm, Eric J., Kellis, Manolis

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Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes by Waterhouse, Robert, Chan, Clara Sophia, Jungreis, Irwin, Novoa Pardo, Eva Maria, Wu, Yi-Chieh, Kellis, Manolis

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Integrative analysis of 111 reference human epigenomes by Kundaje, Anshul, Meuleman, Wouter, Ernst, Jason, Yen, Angela, Kheradpour, Pouya, Zhang, Zhizhuo, Wang, Jianrong, Ward, Lucas D., Sarkar, Abhishek Kulshreshtha, Quon, Gerald, Eaton, Matthew Lucas, Wu, Yi-Chieh, Pfenning, Andreas R., Wang, Xinchen, Claussnitzer, Melina, Liu, Yaping, Bansal, Mukul S., Kim, Ah Ram, Cowper Sal-lari, Richard, Sinnott-Armstrong, Nicholas A., Gjoneska, Elizabeta, Tsai, Li-Huei, Kellis, Manolis, Feizi- Khankandi, Soheil, Boyer, Laurie Ann

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