Translating the human microbiome: a path to improving health by Xavier, Ramnik Joseph

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Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis by Ordovas-Montanes, Jose Manuel, Graham, Daniel B., Shalek, Alexander K, Xavier, Ramnik Joseph, Regev, Aviv

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The Csk-Associated Adaptor PAG Inhibits Effector T Cell Activation in Cooperation with Phosphatase PTPN22 and Dok Adaptors by Davidson, Dominique, Zhong, Ming-Chao, Pandolfi, Pier Paolo, Bolland, Silvia, Seed, Brian, Li, Xin, Gu, Hua, Veillette, André, Xavier, Ramnik Joseph

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Host genetic variation and its microbiome interactions within the Human Microbiome Project by Kolde, Raivo, Rahnavard, Gholamali, Vlamakis, Hera, Stevens, Christine, Huttenhower, Curtis, Franzosa, Eric A., Hall, Andrew Brantley, Daly, Mark J., Xavier, Ramnik Joseph

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Population study of the gut microbiome: associations with diet, lifestyle, and cardiometabolic disease by Walker, Rebecca L., Vlamakis, Hera, Lee, Jonathan W. J., Besse, Luke A., Xanthakis, Vanessa, Vasan, Ramachandran S., Shaw, Stanley Y, Xavier, Ramnik Joseph

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RNF166 Determines Recruitment of Adaptor Proteins during Antibacterial Autophagy by Heath, Robert J., Goel, Gautam, Baxt, Leigh A., Rush, Jason S., Mohanan, Vishnu, Paulus, Geraldine L.C., Jani, Vijay, Lassen, Kara G., Xavier, Ramnik Joseph

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Clinical Activity and Quality of Life Indices Are Valid Across Ulcerative Colitis But Not Crohn’s Disease Phenotypes by Taleban, Sasha, Singh, Prashant, Yajnik, Vijay, Khalili, Hamed, Stewart, Kathleen O., Li, Darrick K., Pardi, Darrell S., Sturgeon, Holly C., Ananthakrishnan, Ashwin N., Xavier, Ramnik Joseph

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Transcription factor TFEB cell-autonomously modulates susceptibility to intestinal epithelial cell injury in vivo by Murano, Tatsuro, Najibi, Mehran, Paulus, Geraldine L. C., Adiliaghdam, Fatemeh, Valencia-Guerrero, Aida, Selig, Martin, Wang, Xiaofei, Jeffrey, Kate, Lassen, Kara G., Irazoqui, Javier E., Xavier, Ramnik Joseph

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Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stability by Yassour, Moran, Vatanen, Tommi, Siljander, Heli, Hämäläinen, Anu-Maaria, Härkönen, Taina, Ryhänen, Samppa J., Franzosa, Eric A., Vlamakis, Hera, Huttenhower, Curtis, Gevers, Dirk, Knip, Mikael, Lander, Eric Steven, Xavier, Ramnik Joseph

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Distinct Tissue-Specific Roles for the Disease-Associated Autophagy Genes ATG16L2 and ATG16L1 by Khor, Bernard, Conway, Kara L., Omar, Abdifatah S., Biton, Moshe, Haber, Adam L., Rogel, Noga, Baxt, Leigh A., Begun, Jakob, Kuballa, Petric, Gagnon, John D., Lassen, Kara G., Regev, Aviv, Xavier, Ramnik Joseph

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Mobile genes in the human microbiome are structured from global to individual scales by Yilmaz, S., Huang, K., Xu, L., Jupiter, S. D., Jenkins, A. P., Naisilisili, W., Tamminen, M., Wortman, J. R., Birren, B. W., Blainey, P. C., Singh, A. K., Gevers, D., Brito, Ilana Lauren, Smillie, Chris S, Alm, Eric J, Xavier, Ramnik Joseph

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TMEM258 Is a Component of the Oligosaccharyltransferase Complex Controlling ER Stress and Intestinal Inflammation by Graham, Daniel B., Lefkovith, Ariel, Deelen, Patrick, de Klein, Niek, Boroughs, Angela, Desch, A. Nicole, Ng, Aylwin C.Y., Petersen, Christine P., Bhan, Atul K., Wijmenga, Cisca, Varma, Mukund Madhav, Guzman, Gaelen Donnelly, Schenone, Monica, Rivas, Manuel A, Carr, Steven A, Xavier, Ramnik Joseph, Daly, Mark J.

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Differential Effects of Environmental and Genetic Factors on T and B Cell Immune Traits by Aguirre-Gamboa, Raul, Joosten, Irma, Urbano, Paulo C.M., van der Molen, Renate G., van Rijssen, Esther, van Cranenbroek, Bram, Oosting, Marije, Smeekens, Sanne, Jaeger, Martin, Zorro, Maria, Withoff, Sebo, van Herwaarden, Antonius E., Sweep, Fred C.G.J., Netea, Romana T., Swertz, Morris A., Franke, Lude, Joosten, Leo A.B., Netea, Mihai G., Wijmenga, Cisca, Kumar, Vinod, Li, Yang, Koenen, Hans J.P.M., Xavier, Ramnik Joseph

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SIKs control osteocyte responses to parathyroid hormone by Wein, Marc N., Liang, Yanke, Goransson, Olga, Sundberg, Thomas B., Wang, Jinhua, Williams, Elizabeth A., O’Meara, Maureen J., Govea, Nicolas, Beqo, Belinda, Nishimori, Shigeki, Nagano, Kenichi, Brooks, Daniel J., Martins, Janaina S., Corbin, Braden, Anselmo, Anthony, Sadreyev, Ruslan, Wu, Joy Y., Sakamoto, Kei, Foretz, Marc, Baron, Roland, Bouxsein, Mary L., Gardella, Thomas J., Divieti-Pajevic, Paola, Gray, Nathanael S., Kronenberg, Henry M., Xavier, Ramnik Joseph

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T Helper Cell Cytokines Modulate Intestinal Stem Cell Renewal and Differentiation by Biton, Moshe, Haber, Adam L., Rogel, Noga, Burgin, Grace, Beyaz, Semir, Schnell, Alexandra, Ashenberg, Orr, Su, Chien-Wen, Smillie, Christopher, Shekhar, Karthik, Chen, Zuojia, Wu, Chuan, Ordovas-Montanes, Jose Manuel, Alvarez, David, Herbst, Rebecca H., Zhang, Mei, Tirosh, Itay, Dionne, Danielle, Nguyen, Lan T., Xifaras, Michael, Shalek, Alexander K, von Andrian, Ulrich H., Graham, Daniel B., Rozenblatt-Rosen, Orit, Shi, Hai Ning, Kuchroo, Vijay, Yilmaz, Omer, Regev, Aviv, Xavier, Ramnik Joseph

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Elevated rates of horizontal gene transfer in the industrialized human microbiome by Groussin, Mathieu, Poyet, Mathilde, Sistiaga Guiterrez, Maria Ainara, Kearney, Sean Michael, Moniz, Katya H, Noel, Mary, Hooker, Jeff, Gibbons, Sean Michael, Segurel, Laure, Froment, Alain, Mohamed, Rihlat Said, Fezeu, Alain, Juimo, Vanessa A., Lafosse, Sophie, Tabe, Francis E., Girard, Catherine, Iqaluk, Deborah, Nguyen, Le Thanh Tu, Shapiro, B. Jesse, Lehtimäki, Jenni, Ruokolainen, Lasse, Kettunen, Pinja P., Vatanen, Tommi, Sigwazi, Shani, Mabulla, Audax, Domínguez-Rodrigo, Manuel, Nartey, Yvonne A., Agyei-Nkansah, Adwoa, Duah, Amoako, Awuku, Yaw A., Valles, Kenneth A., Asibey, Shadrack O., Afihene, Mary Y., Roberts, Lewis R., Plymoth, Amelie, Onyekwere, Charles A., Summons, Roger E, Xavier, Ramnik Joseph, Alm, Eric J

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