Epigenetic domains found in mouse embryonic stem cells via a hidden Markov model by Yuan Guo-Cheng, Larson Jessica L

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A motif-independent metric for DNA sequence specificity by Pinello Luca, Lo Bosco Giosuè, Hanlon Bret, Yuan Guo-Cheng

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Multi-scale chromatin state annotation using a hierarchical hidden Markov model by Huang, Jialiang, Glass, Kimberly, Pinello, Luca, Yuan, Guo-Cheng, Marco Rubio, Eugenio, Meuleman, Wouter, Wang, Jianrong, Kellis, Manolis

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CDK7 Inhibition Suppresses Super-Enhancer-Linked Oncogenic Transcription in MYCN-Driven Cancer by Chipumuro, Edmond, Marco, Eugenio, Christensen, Camilla L., Zhang, Tinghu, Hatheway, Clark M., Sharma, Bandana, Yeung, Caleb, Altabef, Abigail, Perez-Atayde, Antonio, Wong, Kwok-Kin, Yuan, Guo-Cheng, Gray, Nathanael S., George, Rani E., Kwiatkowski, Nick, Abraham, Brian Joseph, Young, Richard A.

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BORIS promotes chromatin regulatory interactions in treatment-resistant cancer cells by Debruyne, David N., Dries, Ruben, Sengupta, Satyaki, Seruggia, Davide, Gao, Yang, Sharma, Bandana, Huang, Hao, Moreau, Lisa, McLane, Michael, Day, Daniel Sindt, Marco, Eugenio, Chen, Ting, Gray, Nathanael S., Wong, Kwok-Kin, Orkin, Stuart H., Yuan, Guo-Cheng, Young, Richard A., George, Rani E.

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BCL11A enhancer dissection by Cas9-mediated in situ saturating mutagenesis by Canver, Matthew C., Smith, Elenoe C., Sher, Falak, Pinello, Luca, Shalem, Ophir, Chen, Diane D., Schupp, Patrick G., Vinjamur, Divya S., Garcia, Sara P., Luc, Sidinh, Kurita, Ryo, Nakamura, Yukio, Fujiwara, Yuko, Maeda, Takahiro, Yuan, Guo-Cheng, Zhang, Feng, Orkin, Stuart H., Bauer, Daniel E., Sanjana, Neville

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The histone demethylase UTX regulates the lineage-specific epigenetic program of invariant natural killer T cells by Beyaz, Semir, Kim, Ji Hyung, Pinello, Luca, Huang, Jialiang, Kerenyi, Marc A, Das, Partha P, Barnitz, R Anthony, Herault, Aurelie, Haining, W Nicholas, Passegue, Emmanuelle, Yuan, Guo-Cheng, Orkin, Stuart H, Winau, Florian, Xifaras, Michael, Dogum, Rizkullah, Yilmaz, Omer, Hu, Yu,M.C.P.Massachusetts Institute of Technology.

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CDK12 loss in cancer cells affects DNA damage response genes through premature cleavage and polyadenylation by Krajewska, Malgorzata, Dries, Ruben, Grassetti, Andrew V, Dust, Sofia, Gao, Yang, Huang, Hao, Sharma, Bandana, Day, Daniel S, Kwiatkowski, Nicholas, Pomaville, Monica, Dodd, Oliver, Chipumuro, Edmond, Zhang, Tinghu, Greenleaf, Arno L, Yuan, Guo-Cheng, Gray, Nathanael S, Young, Richard A, Geyer, Matthias, Gerber, Scott A, George, Rani E

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CDK12 loss in cancer cells affects DNA damage response genes through premature cleavage and polyadenylation by Krajewska, Malgorzata, Dries, Ruben, Grassetti, Andrew V., Dust, Sofia, Gao, Yang, Huang, Hao, Sharma, Bandana, Day, Daniel S., Kwiatkowski, Nicholas, Pomaville, Monica, Dodd, Oliver, Chipumuro, Edmond, Zhang, Tinghu, Greenleaf, Arno L., Yuan, Guo-Cheng, Gray, Nathanael S., Young, Richard A., Geyer, Matthias, Gerber, Scott A., George, Rani E.

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High-fat diet enhances stemness and tumorigenicity of intestinal progenitors by Saadatpour, Assieh, Hong, Sue-Jean, Pinello, Luca, Katz, Yarden, Lamming, Dudley W., Guo, Guoji, Bell, George W., Selig, Martin, Nielsen, G. Petur, Gupta, Nitin, Ferrone, Cristina R., Deshpande, Vikram, Yuan, Guo-Cheng, Orkin, Stuart H., Beyaz, Semir, Mana, Miyeko, Roper, Jatin, Kedrin, Dmitriy, Bauer-Rowe, Khristian E., Xifaras, Michael, Akkad, Adam, Arias, Erika, Shinagare, Shweta, Abu-Remaileh, Monther, Dogum, Rizkullah, Sabatini, David, Yilmaz, Omer, Mihaylova, Maria M.

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