Detection of allele-specific expression in spatial transcriptomics with spASE by Zou, Luli S., Cable, Dylan M., Barrera-Lopez, Irving A., Zhao, Tongtong, Murray, Evan, Aryee, Martin J., Chen, Fei, Irizarry, Rafael A.

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Spatial genomics enables multi-modal study of clonal heterogeneity in tissues by Zhao, Tongtong, Chiang, Zachary D, Morriss, Julia W, LaFave, Lindsay M, Murray, Evan M, Del Priore, Isabella, Meli, Kevin, Lareau, Caleb A, Nadaf, Naeem M, Li, Jilong, Earl, Andrew S, Macosko, Evan Z, Jacks, Tyler, Buenrostro, Jason D, Chen, Fei

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Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling by Lareau, Caleb A, Ludwig, Leif S, Muus, Christoph, Gohil, Satyen H, Zhao, Tongtong, Chiang, Zachary, Pelka, Karin, Verboon, Jeffrey M, Luo, Wendy, Christian, Elena, Rosebrock, Daniel, Getz, Gad, Boland, Genevieve M, Chen, Fei, Buenrostro, Jason D, Hacohen, Nir, Wu, Catherine J, Aryee, Martin J, Regev, Aviv, Sankaran, Vijay G

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