Cooperation between cGAS and RIG-I sensing pathways enables improved innate recognition of HIV-1 by myeloid dendritic cells in elite controllers by Enrique Martin-Gayo, Enrique Martin-Gayo, Ce Gao, Ce Gao, Marta Calvet-Mirabent, Zhengyu Ouyang, Zhengyu Ouyang, Mathias Lichterfeld, Mathias Lichterfeld, Xu G. Yu, Xu G. Yu

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Recommendations of scRNA-seq Differential Gene Expression Analysis Based on Comprehensive Benchmarking by Jake Gagnon, Lira Pi, Matthew Ryals, Qingwen Wan, Wenxing Hu, Zhengyu Ouyang, Baohong Zhang, Kejie Li

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Potent Cell-Intrinsic Immune Responses in Dendritic Cells Facilitate HIV-1-Specific T Cell Immunity in HIV-1 Elite Controllers. by Enrique Martin-Gayo, Maria Jose Buzon, Zhengyu Ouyang, Taylor Hickman, Jacqueline Cronin, Dina Pimenova, Bruce D Walker, Mathias Lichterfeld, Xu G Yu

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Immune-profiling of ZIKV-infected patients identifies a distinct function of plasmacytoid dendritic cells for immune cross-regulation by Xiaoming Sun, Stephane Hua, Ce Gao, Jane E. Blackmer, Zhengyu Ouyang, Kevin Ard, Andrea Ciaranello, Sigal Yawetz, Paul E. Sax, Eric S. Rosenberg, Mathias Lichterfeld, Xu G. Yu

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Chronic Peripheral Inflammation Causes a Region-Specific Myeloid Response in the Central Nervous System by Patrick Süß, Alana Hoffmann, Tobias Rothe, Zhengyu Ouyang, Wolfgang Baum, Ori Staszewski, Georg Schett, Marco Prinz, Gerhard Krönke, Christopher K. Glass, Jürgen Winkler, Johannes C.M. Schlachetzki

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Transcriptional Changes during Naturally Acquired Zika Virus Infection Render Dendritic Cells Highly Conducive to Viral Replication by Xiaoming Sun, Stephane Hua, Hsiao-Rong Chen, Zhengyu Ouyang, Kevin Einkauf, Samantha Tse, Kevin Ard, Andrea Ciaranello, Sigal Yawetz, Paul Sax, Eric S. Rosenberg, Mathias Lichterfeld, Xu G. Yu

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Characterizing the composition of iPSC derived cells from bulk transcriptomics data with CellMap by Zhengyu Ouyang, Nathanael Bourgeois-Tchir, Eugenia Lyashenko, Paige E. Cundiff, Patrick F. Cullen, Ravi Challa, Kejie Li, Xinmin Zhang, Fergal Casey, Sandra J. Engle, Baohong Zhang, Maria I. Zavodszky

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Treatment of HIV-Infected Individuals with the Histone Deacetylase Inhibitor Panobinostat Results in Increased Numbers of Regulatory T Cells and Limits <italic toggle="yes">Ex Vivo... by Christel Rothe Brinkmann, Jesper Falkesgaard Højen, Thomas Aagaard Rasmussen, Anne Sofie Kjær, Rikke Olesen, Paul W. Denton, Lars Østergaard, Zhengyu Ouyang, Mathias Lichterfeld, Xu Yu, Ole Schmeltz Søgaard, Charles Dinarello, Martin Tolstrup

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A Reproducibility-Based Computational Framework Identifies an Inducible, Enhanced Antiviral State in Dendritic Cells from HIV-1 Elite Controllers by Enrique Martin-Gayo, Michael B. Cole, Kellie E. Kolb, Zhengyu Ouyang, Jacqueline Cronin, Samuel W. Kazer, Jose Ordovas-Montanes, Mathias Lichterfeld, Bruce D. Walker, Nir Yosef, Alex K. Shalek, Xu G. Yu

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Integrated single-cell transcriptomics of cerebrospinal fluid cells in treatment-naïve multiple sclerosis by Frederike Straeten, Jing Zhu, Anna-Lena Börsch, Baohong Zhang, Kejie Li, I-Na Lu, Catharina Gross, Michael Heming, Xiaolin Li, Rebekah Rubin, Zhengyu Ouyang, Heinz Wiendl, Michael Mingueneau, Gerd Meyer zu Hörste

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scRNASequest: an ecosystem of scRNA-seq analysis, visualization, and publishing by Kejie Li, Yu H. Sun, Zhengyu Ouyang, Soumya Negi, Zhen Gao, Jing Zhu, Wanli Wang, Yirui Chen, Sarbottam Piya, Wenxing Hu, Maria I. Zavodszky, Hima Yalamanchili, Shaolong Cao, Andrew Gehrke, Mark Sheehan, Dann Huh, Fergal Casey, Xinmin Zhang, Baohong Zhang

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