Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia
Abstract Background Constraints in migratory capabilities, such as the disruption of gene flow and genetic connectivity caused by habitat fragmentation, are known to affect genetic diversity and the long-term persistence of populations. Although negative population trends due to ongoing forest loss...
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| Format: | Article |
| Language: | English |
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BMC
2020-04-01
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| Series: | BMC Genetics |
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| Online Access: | http://link.springer.com/article/10.1186/s12863-020-00849-z |
| _version_ | 1817980322112864256 |
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| author | Jennifer Brunke Isa-Rita M. Russo Pablo Orozco-terWengel Elke Zimmermann Michael W. Bruford Benoit Goossens Ute Radespiel |
| author_facet | Jennifer Brunke Isa-Rita M. Russo Pablo Orozco-terWengel Elke Zimmermann Michael W. Bruford Benoit Goossens Ute Radespiel |
| author_sort | Jennifer Brunke |
| collection | DOAJ |
| description | Abstract Background Constraints in migratory capabilities, such as the disruption of gene flow and genetic connectivity caused by habitat fragmentation, are known to affect genetic diversity and the long-term persistence of populations. Although negative population trends due to ongoing forest loss are widespread, the consequence of habitat fragmentation on genetic diversity, gene flow and genetic structure has rarely been investigated in Bornean small mammals. To fill this gap in knowledge, we used nuclear and mitochondrial DNA markers to assess genetic diversity, gene flow and the genetic structure in the Bornean tree shrew, Tupaia longipes, that inhabits forest fragments of the Lower Kinabatangan Wildlife Sanctuary, Sabah. Furthermore, we used these markers to assess dispersal regimes in male and female T. longipes. Results In addition to the Kinabatangan River, a known barrier for dispersal in tree shrews, the heterogeneous landscape along the riverbanks affected the genetic structure in this species. Specifically, while in larger connected forest fragments along the northern riverbank genetic connectivity was relatively undisturbed, patterns of genetic differentiation and the distribution of mitochondrial haplotypes in a local scale indicated reduced migration on the strongly fragmented southern riverside. Especially, oil palm plantations seem to negatively affect dispersal in T. longipes. Clear sex-biased dispersal was not detected based on relatedness, assignment tests, and haplotype diversity. Conclusion This study revealed the importance of landscape connectivity to maintain migration and gene flow between fragmented populations, and to ensure the long-term persistence of species in anthropogenically disturbed landscapes. |
| first_indexed | 2024-04-13T22:52:43Z |
| format | Article |
| id | doaj.art-00230f5a642a4f00be717bd4ca889003 |
| institution | Directory Open Access Journal |
| issn | 1471-2156 |
| language | English |
| last_indexed | 2024-04-13T22:52:43Z |
| publishDate | 2020-04-01 |
| publisher | BMC |
| record_format | Article |
| series | BMC Genetics |
| spelling | doaj.art-00230f5a642a4f00be717bd4ca8890032022-12-22T02:26:07ZengBMCBMC Genetics1471-21562020-04-0121111310.1186/s12863-020-00849-zDispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, MalaysiaJennifer Brunke0Isa-Rita M. Russo1Pablo Orozco-terWengel2Elke Zimmermann3Michael W. Bruford4Benoit Goossens5Ute Radespiel6University of Veterinary Medicine Hannover, Institute of ZoologyOrganisms and Environment Division, Cardiff University, School of BiosciencesOrganisms and Environment Division, Cardiff University, School of BiosciencesUniversity of Veterinary Medicine Hannover, Institute of ZoologyOrganisms and Environment Division, Cardiff University, School of BiosciencesOrganisms and Environment Division, Cardiff University, School of BiosciencesUniversity of Veterinary Medicine Hannover, Institute of ZoologyAbstract Background Constraints in migratory capabilities, such as the disruption of gene flow and genetic connectivity caused by habitat fragmentation, are known to affect genetic diversity and the long-term persistence of populations. Although negative population trends due to ongoing forest loss are widespread, the consequence of habitat fragmentation on genetic diversity, gene flow and genetic structure has rarely been investigated in Bornean small mammals. To fill this gap in knowledge, we used nuclear and mitochondrial DNA markers to assess genetic diversity, gene flow and the genetic structure in the Bornean tree shrew, Tupaia longipes, that inhabits forest fragments of the Lower Kinabatangan Wildlife Sanctuary, Sabah. Furthermore, we used these markers to assess dispersal regimes in male and female T. longipes. Results In addition to the Kinabatangan River, a known barrier for dispersal in tree shrews, the heterogeneous landscape along the riverbanks affected the genetic structure in this species. Specifically, while in larger connected forest fragments along the northern riverbank genetic connectivity was relatively undisturbed, patterns of genetic differentiation and the distribution of mitochondrial haplotypes in a local scale indicated reduced migration on the strongly fragmented southern riverside. Especially, oil palm plantations seem to negatively affect dispersal in T. longipes. Clear sex-biased dispersal was not detected based on relatedness, assignment tests, and haplotype diversity. Conclusion This study revealed the importance of landscape connectivity to maintain migration and gene flow between fragmented populations, and to ensure the long-term persistence of species in anthropogenically disturbed landscapes.http://link.springer.com/article/10.1186/s12863-020-00849-zForest fragmentationMigrationTupaia longipesBorneoMicrosatellitesCytochrome b |
| spellingShingle | Jennifer Brunke Isa-Rita M. Russo Pablo Orozco-terWengel Elke Zimmermann Michael W. Bruford Benoit Goossens Ute Radespiel Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia BMC Genetics Forest fragmentation Migration Tupaia longipes Borneo Microsatellites Cytochrome b |
| title | Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia |
| title_full | Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia |
| title_fullStr | Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia |
| title_full_unstemmed | Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia |
| title_short | Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia |
| title_sort | dispersal and genetic structure in a tropical small mammal the bornean tree shrew tupaia longipes in a fragmented landscape along the kinabatangan river sabah malaysia |
| topic | Forest fragmentation Migration Tupaia longipes Borneo Microsatellites Cytochrome b |
| url | http://link.springer.com/article/10.1186/s12863-020-00849-z |
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