The complete chloroplast genome of fragrant plantain lily (Hosta ventricosa)
Fragrant plantain lily (Hosta ventricosa) is an ornamental plant and widely cultivated in China due to its environmental adaptability. Here, the complete chloroplast genome of the H. ventricosa has been constructed from the Illumina sequencing data. The circular cp genome is 155,322 bp in size, and...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-04-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1754946 |
| _version_ | 1797639260532113408 |
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| author | Xiao Jie Qu Hong Zhang Liu Chang Hai Sui Shu Ying Liu JinJiao Chen |
| author_facet | Xiao Jie Qu Hong Zhang Liu Chang Hai Sui Shu Ying Liu JinJiao Chen |
| author_sort | Xiao Jie Qu |
| collection | DOAJ |
| description | Fragrant plantain lily (Hosta ventricosa) is an ornamental plant and widely cultivated in China due to its environmental adaptability. Here, the complete chloroplast genome of the H. ventricosa has been constructed from the Illumina sequencing data. The circular cp genome is 155,322 bp in size, and comprises a pair of inverted repeat (IR) regions of 24,912 bp each, a large single-copy (LSC) region of 84,113 bp, and a small single-copy (SSC) region of 20,782 bp. The total GC content is 38.0%, while the corresponding values of the LSC, SSC, and IR region are 36.2%, 32.5%, and 43.4%, respectively. The chloroplast genome contains 135 genes, including 88 protein-coding genes, 8 ribosomal RNA genes, and 39 transfer RNA genes. The neighbor-joining phylogenetic analysis showed a strong sister relationship with Hosta capitata in Hosta. Our findings provide a foundation for further investigation of chloroplast genome evolution in ornamental plant Hosta. |
| first_indexed | 2024-03-11T13:14:16Z |
| format | Article |
| id | doaj.art-005134c578a847b492c5d290206c4cf2 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:14:16Z |
| publishDate | 2020-04-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-005134c578a847b492c5d290206c4cf22023-11-03T13:50:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-04-01521917191810.1080/23802359.2020.17549461754946The complete chloroplast genome of fragrant plantain lily (Hosta ventricosa)Xiao Jie Qu0Hong Zhang Liu1Chang Hai Sui2Shu Ying Liu3JinJiao Chen4Jilin Agricultural UniversityJilin Agricultural UniversityJilin Agricultural UniversityJilin Agricultural UniversityJilin Agricultural UniversityFragrant plantain lily (Hosta ventricosa) is an ornamental plant and widely cultivated in China due to its environmental adaptability. Here, the complete chloroplast genome of the H. ventricosa has been constructed from the Illumina sequencing data. The circular cp genome is 155,322 bp in size, and comprises a pair of inverted repeat (IR) regions of 24,912 bp each, a large single-copy (LSC) region of 84,113 bp, and a small single-copy (SSC) region of 20,782 bp. The total GC content is 38.0%, while the corresponding values of the LSC, SSC, and IR region are 36.2%, 32.5%, and 43.4%, respectively. The chloroplast genome contains 135 genes, including 88 protein-coding genes, 8 ribosomal RNA genes, and 39 transfer RNA genes. The neighbor-joining phylogenetic analysis showed a strong sister relationship with Hosta capitata in Hosta. Our findings provide a foundation for further investigation of chloroplast genome evolution in ornamental plant Hosta.http://dx.doi.org/10.1080/23802359.2020.1754946hosta ventricosachloroplast genomeillumina sequencingphylogenetic analysis |
| spellingShingle | Xiao Jie Qu Hong Zhang Liu Chang Hai Sui Shu Ying Liu JinJiao Chen The complete chloroplast genome of fragrant plantain lily (Hosta ventricosa) Mitochondrial DNA. Part B. Resources hosta ventricosa chloroplast genome illumina sequencing phylogenetic analysis |
| title | The complete chloroplast genome of fragrant plantain lily (Hosta ventricosa) |
| title_full | The complete chloroplast genome of fragrant plantain lily (Hosta ventricosa) |
| title_fullStr | The complete chloroplast genome of fragrant plantain lily (Hosta ventricosa) |
| title_full_unstemmed | The complete chloroplast genome of fragrant plantain lily (Hosta ventricosa) |
| title_short | The complete chloroplast genome of fragrant plantain lily (Hosta ventricosa) |
| title_sort | complete chloroplast genome of fragrant plantain lily hosta ventricosa |
| topic | hosta ventricosa chloroplast genome illumina sequencing phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1754946 |
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