Combining phylogeny and coevolution improves the inference of interaction partners among paralogous proteins.

Predicting protein-protein interactions from sequences is an important goal of computational biology. Various sources of information can be used to this end. Starting from the sequences of two interacting protein families, one can use phylogeny or residue coevolution to infer which paralogs are spec...

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Bibliographic Details
Main Authors: Carlos A Gandarilla-Pérez, Sergio Pinilla, Anne-Florence Bitbol, Martin Weigt
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2023-03-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1011010

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