Physiologically Based Pharmacokinetic Modeling of Nanoparticle Biodistribution: A Review of Existing Models, Simulation Software, and Data Analysis Tools

Cancer treatment and pharmaceutical development require targeted treatment and less toxic therapeutic intervention to achieve real progress against this disease. In this scenario, nanomedicine emerged as a reliable tool to improve drug pharmacokinetics and to translate to the clinical biologics base...

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Main Authors: Elena O. Kutumova, Ilya R. Akberdin, Ilya N. Kiselev, Ruslan N. Sharipov, Vera S. Egorova, Anastasiia O. Syrocheva, Alessandro Parodi, Andrey A. Zamyatnin, Fedor A. Kolpakov
Format: Article
Language:English
Published: MDPI AG 2022-10-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/23/20/12560
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author Elena O. Kutumova
Ilya R. Akberdin
Ilya N. Kiselev
Ruslan N. Sharipov
Vera S. Egorova
Anastasiia O. Syrocheva
Alessandro Parodi
Andrey A. Zamyatnin
Fedor A. Kolpakov
author_facet Elena O. Kutumova
Ilya R. Akberdin
Ilya N. Kiselev
Ruslan N. Sharipov
Vera S. Egorova
Anastasiia O. Syrocheva
Alessandro Parodi
Andrey A. Zamyatnin
Fedor A. Kolpakov
author_sort Elena O. Kutumova
collection DOAJ
description Cancer treatment and pharmaceutical development require targeted treatment and less toxic therapeutic intervention to achieve real progress against this disease. In this scenario, nanomedicine emerged as a reliable tool to improve drug pharmacokinetics and to translate to the clinical biologics based on large molecules. However, the ability of our body to recognize foreign objects together with carrier transport heterogeneity derived from the combination of particle physical and chemical properties, payload and surface modification, make the designing of effective carriers very difficult. In this scenario, physiologically based pharmacokinetic modeling can help to design the particles and eventually predict their ability to reach the target and treat the tumor. This effort is performed by scientists with specific expertise and skills and familiarity with artificial intelligence tools such as advanced software that are not usually in the “cords” of traditional medical or material researchers. The goal of this review was to highlight the advantages that computational modeling could provide to nanomedicine and bring together scientists with different background by portraying in the most simple way the work of computational developers through the description of the tools that they use to predict nanoparticle transport and tumor targeting in our body.
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spelling doaj.art-010baf17b2084df1b736bbb6caccd5d02023-11-24T00:33:29ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672022-10-0123201256010.3390/ijms232012560Physiologically Based Pharmacokinetic Modeling of Nanoparticle Biodistribution: A Review of Existing Models, Simulation Software, and Data Analysis ToolsElena O. Kutumova0Ilya R. Akberdin1Ilya N. Kiselev2Ruslan N. Sharipov3Vera S. Egorova4Anastasiia O. Syrocheva5Alessandro Parodi6Andrey A. Zamyatnin7Fedor A. Kolpakov8Scientific Center for Information Technologies and Artificial Intelligence, Sirius University of Science and Technology, 354340 Sochi, RussiaScientific Center for Information Technologies and Artificial Intelligence, Sirius University of Science and Technology, 354340 Sochi, RussiaScientific Center for Information Technologies and Artificial Intelligence, Sirius University of Science and Technology, 354340 Sochi, RussiaScientific Center for Information Technologies and Artificial Intelligence, Sirius University of Science and Technology, 354340 Sochi, RussiaScientific Center for Translational Medicine, Sirius University of Science and Technology, 354340 Sochi, RussiaScientific Center for Translational Medicine, Sirius University of Science and Technology, 354340 Sochi, RussiaScientific Center for Translational Medicine, Sirius University of Science and Technology, 354340 Sochi, RussiaScientific Center for Translational Medicine, Sirius University of Science and Technology, 354340 Sochi, RussiaScientific Center for Information Technologies and Artificial Intelligence, Sirius University of Science and Technology, 354340 Sochi, RussiaCancer treatment and pharmaceutical development require targeted treatment and less toxic therapeutic intervention to achieve real progress against this disease. In this scenario, nanomedicine emerged as a reliable tool to improve drug pharmacokinetics and to translate to the clinical biologics based on large molecules. However, the ability of our body to recognize foreign objects together with carrier transport heterogeneity derived from the combination of particle physical and chemical properties, payload and surface modification, make the designing of effective carriers very difficult. In this scenario, physiologically based pharmacokinetic modeling can help to design the particles and eventually predict their ability to reach the target and treat the tumor. This effort is performed by scientists with specific expertise and skills and familiarity with artificial intelligence tools such as advanced software that are not usually in the “cords” of traditional medical or material researchers. The goal of this review was to highlight the advantages that computational modeling could provide to nanomedicine and bring together scientists with different background by portraying in the most simple way the work of computational developers through the description of the tools that they use to predict nanoparticle transport and tumor targeting in our body.https://www.mdpi.com/1422-0067/23/20/12560nanoparticlesphysiologically based pharmacokinetic modelingsimulation softwareBioUML
spellingShingle Elena O. Kutumova
Ilya R. Akberdin
Ilya N. Kiselev
Ruslan N. Sharipov
Vera S. Egorova
Anastasiia O. Syrocheva
Alessandro Parodi
Andrey A. Zamyatnin
Fedor A. Kolpakov
Physiologically Based Pharmacokinetic Modeling of Nanoparticle Biodistribution: A Review of Existing Models, Simulation Software, and Data Analysis Tools
International Journal of Molecular Sciences
nanoparticles
physiologically based pharmacokinetic modeling
simulation software
BioUML
title Physiologically Based Pharmacokinetic Modeling of Nanoparticle Biodistribution: A Review of Existing Models, Simulation Software, and Data Analysis Tools
title_full Physiologically Based Pharmacokinetic Modeling of Nanoparticle Biodistribution: A Review of Existing Models, Simulation Software, and Data Analysis Tools
title_fullStr Physiologically Based Pharmacokinetic Modeling of Nanoparticle Biodistribution: A Review of Existing Models, Simulation Software, and Data Analysis Tools
title_full_unstemmed Physiologically Based Pharmacokinetic Modeling of Nanoparticle Biodistribution: A Review of Existing Models, Simulation Software, and Data Analysis Tools
title_short Physiologically Based Pharmacokinetic Modeling of Nanoparticle Biodistribution: A Review of Existing Models, Simulation Software, and Data Analysis Tools
title_sort physiologically based pharmacokinetic modeling of nanoparticle biodistribution a review of existing models simulation software and data analysis tools
topic nanoparticles
physiologically based pharmacokinetic modeling
simulation software
BioUML
url https://www.mdpi.com/1422-0067/23/20/12560
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