The complete chloroplast genome of Passiflora caerulea, a tropical fruit with a distinctive aroma
Passiflora caerulea is native to brazil. In recent years, the edible, medicinal, and ornamental value of P. caerulea has stimulated its wide cultivation in Southeast Asian countries, especially China. Because the chloroplast genome is rich with information about the species evolution as well as its...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-02-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1872442 |
| _version_ | 1797638981829001216 |
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| author | Ying-Feng Niu Shu-Bang Ni Shi-Hong Liu Jin Liu |
| author_facet | Ying-Feng Niu Shu-Bang Ni Shi-Hong Liu Jin Liu |
| author_sort | Ying-Feng Niu |
| collection | DOAJ |
| description | Passiflora caerulea is native to brazil. In recent years, the edible, medicinal, and ornamental value of P. caerulea has stimulated its wide cultivation in Southeast Asian countries, especially China. Because the chloroplast genome is rich with information about the species evolution as well as its genetic relationship to other species, the P. caerulea chloroplast genome was sequenced, assembled, and annotated in this study. The P. caerulea chloroplast genome is 151,362 bp in total with an overall GC content of 37.03%. It has a quadripartite structure, includes a large single-copy region (LSC, 85,623 bp), a small single-copy region (SSC, 13,397 bp), and two inverted repeat regions (IRa and IRb, 26,180 bp combined). There are 131 genes in the P. caerulea chloroplast genome, including 79 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 7 pseudogenes. Phylogenetic analysis of 29 Passiflora spp. showed that P. caerulea is most closely related to P. edulis. These results provide a considerable foundation for P. caerulea conservation genetics research. |
| first_indexed | 2024-03-11T13:10:13Z |
| format | Article |
| id | doaj.art-012a1d28298c40448c42b0ae91d9f07c |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:10:13Z |
| publishDate | 2021-02-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-012a1d28298c40448c42b0ae91d9f07c2023-11-03T14:08:19ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-02-016248849010.1080/23802359.2021.18724421872442The complete chloroplast genome of Passiflora caerulea, a tropical fruit with a distinctive aromaYing-Feng Niu0Shu-Bang Ni1Shi-Hong Liu2Jin Liu3Yunnan Institute of Tropical CropsYunnan Institute of Tropical CropsYunnan Institute of Tropical CropsYunnan Institute of Tropical CropsPassiflora caerulea is native to brazil. In recent years, the edible, medicinal, and ornamental value of P. caerulea has stimulated its wide cultivation in Southeast Asian countries, especially China. Because the chloroplast genome is rich with information about the species evolution as well as its genetic relationship to other species, the P. caerulea chloroplast genome was sequenced, assembled, and annotated in this study. The P. caerulea chloroplast genome is 151,362 bp in total with an overall GC content of 37.03%. It has a quadripartite structure, includes a large single-copy region (LSC, 85,623 bp), a small single-copy region (SSC, 13,397 bp), and two inverted repeat regions (IRa and IRb, 26,180 bp combined). There are 131 genes in the P. caerulea chloroplast genome, including 79 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 7 pseudogenes. Phylogenetic analysis of 29 Passiflora spp. showed that P. caerulea is most closely related to P. edulis. These results provide a considerable foundation for P. caerulea conservation genetics research.http://dx.doi.org/10.1080/23802359.2021.1872442passiflora caeruleachloroplast genomephylogenetic analysis |
| spellingShingle | Ying-Feng Niu Shu-Bang Ni Shi-Hong Liu Jin Liu The complete chloroplast genome of Passiflora caerulea, a tropical fruit with a distinctive aroma Mitochondrial DNA. Part B. Resources passiflora caerulea chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome of Passiflora caerulea, a tropical fruit with a distinctive aroma |
| title_full | The complete chloroplast genome of Passiflora caerulea, a tropical fruit with a distinctive aroma |
| title_fullStr | The complete chloroplast genome of Passiflora caerulea, a tropical fruit with a distinctive aroma |
| title_full_unstemmed | The complete chloroplast genome of Passiflora caerulea, a tropical fruit with a distinctive aroma |
| title_short | The complete chloroplast genome of Passiflora caerulea, a tropical fruit with a distinctive aroma |
| title_sort | complete chloroplast genome of passiflora caerulea a tropical fruit with a distinctive aroma |
| topic | passiflora caerulea chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1872442 |
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