Revising transcriptome assemblies with phylogenetic information.
A common transcriptome assembly error is to mistake different transcripts of the same gene as transcripts from multiple closely related genes. This error is difficult to identify during assembly, but in a phylogenetic analysis such errors can be diagnosed from gene phylogenies where they appear as c...
Main Authors: | August Guang, Mark Howison, Felipe Zapata, Charles Lawrence, Casey W Dunn |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2021-01-01
|
Series: | PLoS ONE |
Online Access: | https://doi.org/10.1371/journal.pone.0244202 |
Similar Items
-
Incorporating Within-Host Diversity in Phylogenetic Analyses for Detecting Clusters of New HIV Diagnoses
by: August Guang, et al.
Published: (2022-02-01) -
Bayesian genome assembly and assessment by markov chain monte carlo sampling.
by: Mark Howison, et al.
Published: (2014-01-01) -
The sugarcane mitochondrial genome: assembly, phylogenetics and transcriptomics
by: Dyfed Lloyd Evans, et al.
Published: (2019-09-01) -
Phylogenetic comparative assembly
by: Husemann Peter, et al.
Published: (2010-01-01) -
Phylogenetic patterns of colonization and extinction in experimentally assembled plant communities.
by: Marc W Cadotte, et al.
Published: (2011-01-01)