Nucleic Acid-Based Sensing Techniques for Diagnostics and Surveillance of Influenza

Influenza virus poses a threat to global health by causing seasonal outbreaks as well as three pandemics in the 20th century. In humans, disease is primarily caused by influenza A and B viruses, while influenza C virus causes mild disease mostly in children. Influenza D is an emerging virus found in...

Full description

Bibliographic Details
Main Authors: Samantha J. Courtney, Zachary R. Stromberg, Jessica Z. Kubicek-Sutherland
Format: Article
Language:English
Published: MDPI AG 2021-02-01
Series:Biosensors
Subjects:
Online Access:https://www.mdpi.com/2079-6374/11/2/47
_version_ 1797396827144716288
author Samantha J. Courtney
Zachary R. Stromberg
Jessica Z. Kubicek-Sutherland
author_facet Samantha J. Courtney
Zachary R. Stromberg
Jessica Z. Kubicek-Sutherland
author_sort Samantha J. Courtney
collection DOAJ
description Influenza virus poses a threat to global health by causing seasonal outbreaks as well as three pandemics in the 20th century. In humans, disease is primarily caused by influenza A and B viruses, while influenza C virus causes mild disease mostly in children. Influenza D is an emerging virus found in cattle and pigs. To mitigate the morbidity and mortality associated with influenza, rapid and accurate diagnostic tests need to be deployed. However, the high genetic diversity displayed by influenza viruses presents a challenge to the development of a robust diagnostic test. Nucleic acid-based tests are more accurate than rapid antigen tests for influenza and are therefore better candidates to be used in both diagnostic and surveillance applications. Here, we review various nucleic acid-based techniques that have been applied towards the detection of influenza viruses in order to evaluate their utility as both diagnostic and surveillance tools. We discuss both traditional as well as novel methods to detect influenza viruses by covering techniques that require nucleic acid amplification or direct detection of viral RNA as well as comparing advantages and limitations for each method. There has been substantial progress in the development of nucleic acid-based sensing techniques for the detection of influenza virus. However, there is still an urgent need for a rapid and reliable influenza diagnostic test that can be used at point-of-care in order to enhance responsiveness to both seasonal and pandemic influenza outbreaks.
first_indexed 2024-03-09T00:57:10Z
format Article
id doaj.art-024613b2b7e44720b8fcec3979c33ce8
institution Directory Open Access Journal
issn 2079-6374
language English
last_indexed 2024-03-09T00:57:10Z
publishDate 2021-02-01
publisher MDPI AG
record_format Article
series Biosensors
spelling doaj.art-024613b2b7e44720b8fcec3979c33ce82023-12-11T16:48:36ZengMDPI AGBiosensors2079-63742021-02-011124710.3390/bios11020047Nucleic Acid-Based Sensing Techniques for Diagnostics and Surveillance of InfluenzaSamantha J. Courtney0Zachary R. Stromberg1Jessica Z. Kubicek-Sutherland2Physical Chemistry and Applied Spectroscopy, Los Alamos National Laboratory, Chemistry Division, Los Alamos, NM 87545, USAPhysical Chemistry and Applied Spectroscopy, Los Alamos National Laboratory, Chemistry Division, Los Alamos, NM 87545, USAPhysical Chemistry and Applied Spectroscopy, Los Alamos National Laboratory, Chemistry Division, Los Alamos, NM 87545, USAInfluenza virus poses a threat to global health by causing seasonal outbreaks as well as three pandemics in the 20th century. In humans, disease is primarily caused by influenza A and B viruses, while influenza C virus causes mild disease mostly in children. Influenza D is an emerging virus found in cattle and pigs. To mitigate the morbidity and mortality associated with influenza, rapid and accurate diagnostic tests need to be deployed. However, the high genetic diversity displayed by influenza viruses presents a challenge to the development of a robust diagnostic test. Nucleic acid-based tests are more accurate than rapid antigen tests for influenza and are therefore better candidates to be used in both diagnostic and surveillance applications. Here, we review various nucleic acid-based techniques that have been applied towards the detection of influenza viruses in order to evaluate their utility as both diagnostic and surveillance tools. We discuss both traditional as well as novel methods to detect influenza viruses by covering techniques that require nucleic acid amplification or direct detection of viral RNA as well as comparing advantages and limitations for each method. There has been substantial progress in the development of nucleic acid-based sensing techniques for the detection of influenza virus. However, there is still an urgent need for a rapid and reliable influenza diagnostic test that can be used at point-of-care in order to enhance responsiveness to both seasonal and pandemic influenza outbreaks.https://www.mdpi.com/2079-6374/11/2/47influenzaviral diagnosticssurveillancenucleic acid amplification testdirect detectionpandemic preparedness
spellingShingle Samantha J. Courtney
Zachary R. Stromberg
Jessica Z. Kubicek-Sutherland
Nucleic Acid-Based Sensing Techniques for Diagnostics and Surveillance of Influenza
Biosensors
influenza
viral diagnostics
surveillance
nucleic acid amplification test
direct detection
pandemic preparedness
title Nucleic Acid-Based Sensing Techniques for Diagnostics and Surveillance of Influenza
title_full Nucleic Acid-Based Sensing Techniques for Diagnostics and Surveillance of Influenza
title_fullStr Nucleic Acid-Based Sensing Techniques for Diagnostics and Surveillance of Influenza
title_full_unstemmed Nucleic Acid-Based Sensing Techniques for Diagnostics and Surveillance of Influenza
title_short Nucleic Acid-Based Sensing Techniques for Diagnostics and Surveillance of Influenza
title_sort nucleic acid based sensing techniques for diagnostics and surveillance of influenza
topic influenza
viral diagnostics
surveillance
nucleic acid amplification test
direct detection
pandemic preparedness
url https://www.mdpi.com/2079-6374/11/2/47
work_keys_str_mv AT samanthajcourtney nucleicacidbasedsensingtechniquesfordiagnosticsandsurveillanceofinfluenza
AT zacharyrstromberg nucleicacidbasedsensingtechniquesfordiagnosticsandsurveillanceofinfluenza
AT jessicazkubiceksutherland nucleicacidbasedsensingtechniquesfordiagnosticsandsurveillanceofinfluenza