E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding Protein

The SPL2 protein is an E3 ubiquitin ligase of unknown function. It is one of only three types of E3 ligases found in the outer membrane of plant chloroplasts. In this study, we show that the cytosolic fragment of SPL2 binds lanthanide ions, as evidenced by fluorescence measurements and circular dich...

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Main Authors: Michał Tracz, Ireneusz Górniak, Andrzej Szczepaniak, Wojciech Białek
Format: Article
Language:English
Published: MDPI AG 2021-05-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:https://www.mdpi.com/1422-0067/22/11/5712
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author Michał Tracz
Ireneusz Górniak
Andrzej Szczepaniak
Wojciech Białek
author_facet Michał Tracz
Ireneusz Górniak
Andrzej Szczepaniak
Wojciech Białek
author_sort Michał Tracz
collection DOAJ
description The SPL2 protein is an E3 ubiquitin ligase of unknown function. It is one of only three types of E3 ligases found in the outer membrane of plant chloroplasts. In this study, we show that the cytosolic fragment of SPL2 binds lanthanide ions, as evidenced by fluorescence measurements and circular dichroism spectroscopy. We also report that SPL2 undergoes conformational changes upon binding of both Ca<sup>2+</sup> and La<sup>3+</sup>, as evidenced by its partial unfolding. However, these structural rearrangements do not interfere with SPL2 enzymatic activity, as the protein retains its ability to auto-ubiquitinate in vitro. The possible applications of lanthanide-based probes to identify protein interactions in vivo are also discussed. Taken together, the results of this study reveal that the SPL2 protein contains a lanthanide-binding site, showing for the first time that at least some E3 ubiquitin ligases are also capable of binding lanthanide ions.
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spelling doaj.art-0248384c10924de888c5506e139010ba2023-11-21T21:37:00ZengMDPI AGInternational Journal of Molecular Sciences1661-65961422-00672021-05-012211571210.3390/ijms22115712E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding ProteinMichał Tracz0Ireneusz Górniak1Andrzej Szczepaniak2Wojciech Białek3Department of Biophysics, Faculty of Biotechnology, University of Wrocław, Joliot-Curie 14a, 50-383 Wrocław, PolandDepartment of Biophysics, Faculty of Biotechnology, University of Wrocław, Joliot-Curie 14a, 50-383 Wrocław, PolandDepartment of Biophysics, Faculty of Biotechnology, University of Wrocław, Joliot-Curie 14a, 50-383 Wrocław, PolandDepartment of Biophysics, Faculty of Biotechnology, University of Wrocław, Joliot-Curie 14a, 50-383 Wrocław, PolandThe SPL2 protein is an E3 ubiquitin ligase of unknown function. It is one of only three types of E3 ligases found in the outer membrane of plant chloroplasts. In this study, we show that the cytosolic fragment of SPL2 binds lanthanide ions, as evidenced by fluorescence measurements and circular dichroism spectroscopy. We also report that SPL2 undergoes conformational changes upon binding of both Ca<sup>2+</sup> and La<sup>3+</sup>, as evidenced by its partial unfolding. However, these structural rearrangements do not interfere with SPL2 enzymatic activity, as the protein retains its ability to auto-ubiquitinate in vitro. The possible applications of lanthanide-based probes to identify protein interactions in vivo are also discussed. Taken together, the results of this study reveal that the SPL2 protein contains a lanthanide-binding site, showing for the first time that at least some E3 ubiquitin ligases are also capable of binding lanthanide ions.https://www.mdpi.com/1422-0067/22/11/5712ubiquitinationchloroplastlanthanidesSPL2
spellingShingle Michał Tracz
Ireneusz Górniak
Andrzej Szczepaniak
Wojciech Białek
E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding Protein
International Journal of Molecular Sciences
ubiquitination
chloroplast
lanthanides
SPL2
title E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding Protein
title_full E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding Protein
title_fullStr E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding Protein
title_full_unstemmed E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding Protein
title_short E3 Ubiquitin Ligase SPL2 Is a Lanthanide-Binding Protein
title_sort e3 ubiquitin ligase spl2 is a lanthanide binding protein
topic ubiquitination
chloroplast
lanthanides
SPL2
url https://www.mdpi.com/1422-0067/22/11/5712
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AT ireneuszgorniak e3ubiquitinligasespl2isalanthanidebindingprotein
AT andrzejszczepaniak e3ubiquitinligasespl2isalanthanidebindingprotein
AT wojciechbiałek e3ubiquitinligasespl2isalanthanidebindingprotein