Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis
Trichagalma acutissimae (Monzen) (Hymenoptera: Cynipidae) is a major pest of Quercus variabilis Blume in the Taihang Mountains in China. In this study, we sequenced and analyzed the mitochondrial genome (mitogenome) of T. acutissimae. This mitogenome was 16,078 bp long and encoded 13 protein-coding...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1721366 |
| _version_ | 1797639394428977152 |
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| author | Shuang Xue Yuanchen Zhang Shanshan Gao Shaohui Lu Jingshun Wang Kunpeng Zhang |
| author_facet | Shuang Xue Yuanchen Zhang Shanshan Gao Shaohui Lu Jingshun Wang Kunpeng Zhang |
| author_sort | Shuang Xue |
| collection | DOAJ |
| description | Trichagalma acutissimae (Monzen) (Hymenoptera: Cynipidae) is a major pest of Quercus variabilis Blume in the Taihang Mountains in China. In this study, we sequenced and analyzed the mitochondrial genome (mitogenome) of T. acutissimae. This mitogenome was 16,078 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA unit genes (rRNAs). The whole mitogenome exhibited heavy AT nucleotide bias (86.2%). Except for nad4L that started with TTG, all other PCGs started with the standard ATN codon. All 13 PCGs terminate with the stop codon TAA. Phylogenetic analysis showed that T. acutissimae got together with Synergus sp. with high support value, indicating the close relationship of these two genus. All five Cynipoidea species constituted a major clade and formed a sister group to Proctotrupoidea and Chalcidoidea. |
| first_indexed | 2024-03-11T13:17:11Z |
| format | Article |
| id | doaj.art-0254d3cedd2d451aa9fc5fcf9a062428 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:17:11Z |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-0254d3cedd2d451aa9fc5fcf9a0624282023-11-03T11:00:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-01511073107410.1080/23802359.2020.17213661721366Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysisShuang Xue0Yuanchen Zhang1Shanshan Gao2Shaohui Lu3Jingshun Wang4Kunpeng Zhang5College of Biology and Food Engineering, Anyang Institute of TechnologyCollege of Biology and Food Engineering, Anyang Institute of TechnologyCollege of Biology and Food Engineering, Anyang Institute of TechnologyHenan Academy of ForestryCollege of Biology and Food Engineering, Anyang Institute of TechnologyCollege of Biology and Food Engineering, Anyang Institute of TechnologyTrichagalma acutissimae (Monzen) (Hymenoptera: Cynipidae) is a major pest of Quercus variabilis Blume in the Taihang Mountains in China. In this study, we sequenced and analyzed the mitochondrial genome (mitogenome) of T. acutissimae. This mitogenome was 16,078 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA unit genes (rRNAs). The whole mitogenome exhibited heavy AT nucleotide bias (86.2%). Except for nad4L that started with TTG, all other PCGs started with the standard ATN codon. All 13 PCGs terminate with the stop codon TAA. Phylogenetic analysis showed that T. acutissimae got together with Synergus sp. with high support value, indicating the close relationship of these two genus. All five Cynipoidea species constituted a major clade and formed a sister group to Proctotrupoidea and Chalcidoidea.http://dx.doi.org/10.1080/23802359.2020.1721366cynipidaemitochondrial genometrichagalma acutissimaephylogenetic analysis |
| spellingShingle | Shuang Xue Yuanchen Zhang Shanshan Gao Shaohui Lu Jingshun Wang Kunpeng Zhang Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis Mitochondrial DNA. Part B. Resources cynipidae mitochondrial genome trichagalma acutissimae phylogenetic analysis |
| title | Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis |
| title_full | Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis |
| title_fullStr | Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis |
| title_full_unstemmed | Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis |
| title_short | Mitochondrial genome of Trichagalma acutissimae (Hymenoptera: Cynipoidea: Cynipidae) and phylogenetic analysis |
| title_sort | mitochondrial genome of trichagalma acutissimae hymenoptera cynipoidea cynipidae and phylogenetic analysis |
| topic | cynipidae mitochondrial genome trichagalma acutissimae phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1721366 |
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