Identification and Analysis of Small Interfering RNAs Associated With Heat Stress in Flowering Chinese Cabbage Using High-Throughput Sequencing

Identification and Analysis of Small Interfering RNAs Associated With Heat Stress in Flowering Chinese Cabbage Using High-Throughput Sequencing

Endogenous small interfering RNAs (siRNAs) are substantial gene regulators in eukaryotes and play key functions in plant development and stress tolerance. Among environmental factors, heat is serious abiotic stress that severely influences the productivity and quality of flowering Chinese cabbage (B...

Full description

Bibliographic Details
Main Authors:	Waqas Ahmed, Yanshi Xia, Ronghua Li, Hua Zhang, Kadambot H.M Siddique, Peiguo Guo
Format:	Article
Language:	English
Published:	Frontiers Media S.A. 2021-11-01
Series:	Frontiers in Genetics
Subjects:	brassica non-coding RNA high-throughput sequencing flowering Chinese cabbage siRNA heat stress
Online Access:	https://www.frontiersin.org/articles/10.3389/fgene.2021.746816/full

Similar Items

Foliar application of liquiritin protects Chinese flowering cabbage against cucumber mosaic virus and increases health-promoting compounds
by: Waheed Akram, et al.
Published: (2021-01-01)

Transcriptome Analysis of Intermittent Light Induced Early Bolting in Flowering Chinese Cabbage
by: Caizhu Hu, et al.
Published: (2024-03-01)

Comprehensive transcriptome analysis reveals heat-responsive genes in flowering Chinese cabbage (Brassica campestris L. ssp. chinensis) using RNA sequencing
by: Muhammad Ikram, et al.
Published: (2022-12-01)

Genetic Variations of AUF2 Gene and Their Association with Agronomic Traits in Flowering Chinese Cabbage
by: Yilin HUANG, et al.
Published: (2023-04-01)

Characterizing ncRNAs in human pathogenic protists using high-throughput sequencing technology
by: Lesley Joan Collins
Published: (2011-12-01)

Effect of Nitrate Concentration on the Growth, Bolting and Related Gene Expression in Flowering Chinese Cabbage
by: Yudan Wang, et al.
Published: (2021-05-01)

Current Aspects of siRNA Bioconjugate for In Vitro and In Vivo Delivery
by: Wanyi Tai
Published: (2019-06-01)

Small Interfering RNAs Are Highly Effective Inhibitors of Crimean-Congo Hemorrhagic Fever Virus Replication In Vitro
by: Fanni Földes, et al.
Published: (2020-12-01)

Identification of <i>DELLA</i> Genes and Key Stage for GA Sensitivity in Bolting and Flowering of Flowering Chinese Cabbage
by: Hongling Guan, et al.
Published: (2021-11-01)

Small interfering RNAs (siRNAs) in cancer therapy: a nano-based approach
by: Mahmoodi Chalbatani G, et al.
Published: (2019-05-01)

Identifying Cleaved and Noncleaved Targets of Small Interfering RNAs and MicroRNAs in Mammalian Cells by SpyCLIP
by: Yao Zhang, et al.
Published: (2020-12-01)

Trimeric Small Interfering RNAs and Their Cholesterol-Containing Conjugates Exhibit Improved Accumulation in Tumors, but Dramatically Reduced Silencing Activity
by: Ivan V. Chernikov, et al.
Published: (2020-04-01)

Disease-resistant varieties of Chinese cabbage (Brassica rapa L. ssp. pekinensis) inhibit Plasmodiophora brassicae infestation by stabilising root flora structure
by: Tianyi Fang, et al.
Published: (2024-03-01)

Effects of Iron Deficiency Stress on Plant Growth and Quality in Flowering Chinese Cabbage and Its Adaptive Response
by: Yanping Wang, et al.
Published: (2022-04-01)

New Insight about of microRNAs & short interfering RNA in Treatment of COVID-19; a Narrative Review
by: Mohammad Ali Salahshoor, et al.
Published: (2022-03-01)

Genome-Wide Identification of the NF-Y Gene Family and Their Involvement in Bolting and Flowering in Flowering Chinese Cabbage
by: Zhehao Jiang, et al.
Published: (2023-07-01)

Compensatory sequence variation between trans-species small RNAs and their target sites
by: Nathan R Johnson, et al.
Published: (2019-12-01)

RNA Interference as a Prospective Tool for the Control of Human Viral Infections
by: Alesia Levanova, et al.
Published: (2018-09-01)

Engineering siRNA therapeutics: challenges and strategies
by: Syed Saqib Ali Zaidi, et al.
Published: (2023-10-01)

Strand Analysis, a free online program for the computational identification of the best RNA interference (RNAi) targets based on Gibbs free energy
by: Tiago Campos Pereira, et al.
Published: (2007-01-01)

Development of therapeutic-grade small interfering RNAs by chemical engineering
by: Jesper Bertram Bramsen, et al.
Published: (2012-08-01)

Systems Virology and Human Cytomegalovirus: Using High Throughput Approaches to Identify Novel Host-Virus Interactions During Lytic Infection
by: Chen-Hsuin Lee, et al.
Published: (2020-06-01)

Cheminformatics Modeling of Gene Silencing for Both Natural and Chemically Modified siRNAs
by: Xialan Dong, et al.
Published: (2022-09-01)

A Lipid-Coated Nanoconstruct Composed of Gold Nanoparticles Noncovalently Coated with Small Interfering RNA: Preparation, Purification and Characterization
by: Anna V. Epanchintseva, et al.
Published: (2021-10-01)

In Vitro Acquisition of Specific Small Interfering RNAs Inhibits the Expression of Some Target Genes in the Plant Ectoparasite <i>Xiphinema index</i>
by: Aurélie Marmonier, et al.
Published: (2019-07-01)

Small Interfering RNA Therapeutics in Hypertension: A Viewpoint on Vasopressor and Vasopressor‐Sparing Strategies for Counteracting Blood Pressure Lowering by Angiotensinogen–Targeting Small Interfering RNA
by: Priyanga Ranasinghe, et al.
Published: (2022-10-01)

Nucleic Acid-Based Treatments Against COVID-19: Potential Efficacy of Aptamers and siRNAs
by: Javad Khanali, et al.
Published: (2021-11-01)

Pol IV-Dependent siRNA Production is Reduced in Brassica rapa
by: Rebecca A. Mosher, et al.
Published: (2013-09-01)

Machine learning for small interfering RNAs: a concise review of recent developments
by: Minhyeok Lee
Published: (2023-07-01)

Fast tracking alien gene discovery by molecular markers in a late flowering Chinese cabbage-cabbage translocation line ‘AT7–4’
by: Hui Li, et al.
Published: (2023-02-01)

S-Acyl-2-Thioethyl: A Convenient Base-Labile Protecting Group for the Synthesis of siRNAs Containing 5′-Vinylphosphonate
by: Mehran Nikan, et al.
Published: (2019-01-01)

Inclisiran—Safety and Effectiveness of Small Interfering RNA in Inhibition of PCSK-9
by: Łukasz Wołowiec, et al.
Published: (2023-01-01)

Delivery of therapeutic small interfering RNA: The current patent-based landscape
by: Yu Chen, et al.
Published: (2022-09-01)

Secondary Small Interfering RNA-Based Silencing Tools in Plants: An Update
by: Alberto Carbonell
Published: (2019-05-01)

Microspore induced Doubled Haploids production from ethyl methanesulfonate (EMS) soaked flower buds is an eEfficient strategy for mutagenesis in Chinese cabbage
by: yin lu, et al.
Published: (2016-11-01)

Promising Directions in Atherosclerosis Treatment Based on Epigenetic Regulation Using MicroRNAs and Long Noncoding RNAs
by: Daria Skuratovskaia, et al.
Published: (2019-06-01)

Structural Modifications of siRNA Improve Its Performance In Vivo
by: Ivan V. Chernikov, et al.
Published: (2023-01-01)

An Influence of Modification with Phosphoryl Guanidine Combined with a 2′-O-Methyl or 2′-Fluoro Group on the Small-Interfering-RNA Effect
by: Anna S. Pavlova, et al.
Published: (2021-09-01)

Systemically Silencing Long Non-coding RNAs Maclpil With Short Interfering RNA Nanoparticles Alleviates Experimental Ischemic Stroke by Promoting Macrophage Apoptosis and Anti-inflammatory Activation
by: Yan Wang, et al.
Published: (2022-05-01)

Are Argonaute-Associated Tiny RNAs Junk, Inferior miRNAs, or a New Type of Functional RNAs?
by: Kotaro Nakanishi, et al.
Published: (2021-12-01)