Complete chloroplast genome sequence of an endangered tree species, Magnolia sieboldii (Magnoliaceae)
The characteristic of complete chloroplast (cp) genome of Magnolia sieboldii, an endangered species in China, was first sequenced in this study. It showed a typical quadripartite structure with a length of 160,177 bp. It composed of a large single copy (LSC) region of 88,238 bp, a small single copy...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1532826 |
| _version_ | 1797640583970291712 |
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| author | Jianmei Gao Yu Song Baojiang Zheng |
| author_facet | Jianmei Gao Yu Song Baojiang Zheng |
| author_sort | Jianmei Gao |
| collection | DOAJ |
| description | The characteristic of complete chloroplast (cp) genome of Magnolia sieboldii, an endangered species in China, was first sequenced in this study. It showed a typical quadripartite structure with a length of 160,177 bp. It composed of a large single copy (LSC) region of 88,238 bp, a small single copy (SSC) region of 18,763 bp, and a pair of inverted repeat (IR) regions of 26,588 bp. Further maximum parsimony phylogenetic analysis was performed based on 38 complete plastomes from 30 magnoliids and basal angiosperm species. The result supported a close relationship among M. grandiflora, M. officinals, M. sieboldii, and M. tripetala. |
| first_indexed | 2024-03-11T13:34:00Z |
| format | Article |
| id | doaj.art-02c78ad74a584af1b1c99aab78326efd |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:00Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-02c78ad74a584af1b1c99aab78326efd2023-11-02T15:57:27ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-01321261126210.1080/23802359.2018.15328261532826Complete chloroplast genome sequence of an endangered tree species, Magnolia sieboldii (Magnoliaceae)Jianmei Gao0Yu Song1Baojiang Zheng2Chinese Academy of Sciences, MenglunChinese Academy of Sciences, MenglunNortheast Forestry UniversityThe characteristic of complete chloroplast (cp) genome of Magnolia sieboldii, an endangered species in China, was first sequenced in this study. It showed a typical quadripartite structure with a length of 160,177 bp. It composed of a large single copy (LSC) region of 88,238 bp, a small single copy (SSC) region of 18,763 bp, and a pair of inverted repeat (IR) regions of 26,588 bp. Further maximum parsimony phylogenetic analysis was performed based on 38 complete plastomes from 30 magnoliids and basal angiosperm species. The result supported a close relationship among M. grandiflora, M. officinals, M. sieboldii, and M. tripetala.http://dx.doi.org/10.1080/23802359.2018.1532826magnolia sieboldiiendangered specieschloroplast genomephylogenetic analysis |
| spellingShingle | Jianmei Gao Yu Song Baojiang Zheng Complete chloroplast genome sequence of an endangered tree species, Magnolia sieboldii (Magnoliaceae) Mitochondrial DNA. Part B. Resources magnolia sieboldii endangered species chloroplast genome phylogenetic analysis |
| title | Complete chloroplast genome sequence of an endangered tree species, Magnolia sieboldii (Magnoliaceae) |
| title_full | Complete chloroplast genome sequence of an endangered tree species, Magnolia sieboldii (Magnoliaceae) |
| title_fullStr | Complete chloroplast genome sequence of an endangered tree species, Magnolia sieboldii (Magnoliaceae) |
| title_full_unstemmed | Complete chloroplast genome sequence of an endangered tree species, Magnolia sieboldii (Magnoliaceae) |
| title_short | Complete chloroplast genome sequence of an endangered tree species, Magnolia sieboldii (Magnoliaceae) |
| title_sort | complete chloroplast genome sequence of an endangered tree species magnolia sieboldii magnoliaceae |
| topic | magnolia sieboldii endangered species chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2018.1532826 |
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