Systematic Evaluation of Whole-Genome Sequencing Based Prediction of Antimicrobial Resistance in Campylobacter jejuni and C. coli

Systematic Evaluation of Whole-Genome Sequencing Based Prediction of Antimicrobial Resistance in Campylobacter jejuni and C. coli

The increasing prevalence of antimicrobial resistance (AMR) in Campylobacter spp. is a global concern. This study evaluated the use of whole-genome sequencing (WGS) to predict AMR in Campylobacter jejuni and C. coli. A panel of 271 isolates recovered from Canadian poultry was used to compare AMR gen...

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Bibliographic Details
Main Authors: Lisa M. Hodges, Eduardo N. Taboada, Adam Koziol, Steven Mutschall, Burton W. Blais, G. Douglas Inglis, Daniel Leclair, Catherine D. Carrillo
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-11-01
Series:Frontiers in Microbiology
Subjects:
Campylobacter
antimicrobial resistance
whole-genome sequence (WGS)
bioinformatic tools
AMR surveillance
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2021.776967/full

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