Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer

Triple-negative breast cancer (TNBC) is a highly heterogeneous disease defined by the absence of estrogen receptor (ER) and progesterone receptor (PR) expression, and human epidermal growth factor receptor 2 (HER2) overexpression that lacks targeted treatments, leading to dismal clinical outcomes. T...

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Main Authors: Miquel Ensenyat-Mendez, Pere Llinàs-Arias, Javier I. J. Orozco, Sandra Íñiguez-Muñoz, Matthew P. Salomon, Borja Sesé, Maggie L. DiNome, Diego M. Marzese
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-06-01
Series:Frontiers in Oncology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fonc.2021.681476/full
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author Miquel Ensenyat-Mendez
Pere Llinàs-Arias
Javier I. J. Orozco
Sandra Íñiguez-Muñoz
Matthew P. Salomon
Borja Sesé
Maggie L. DiNome
Diego M. Marzese
author_facet Miquel Ensenyat-Mendez
Pere Llinàs-Arias
Javier I. J. Orozco
Sandra Íñiguez-Muñoz
Matthew P. Salomon
Borja Sesé
Maggie L. DiNome
Diego M. Marzese
author_sort Miquel Ensenyat-Mendez
collection DOAJ
description Triple-negative breast cancer (TNBC) is a highly heterogeneous disease defined by the absence of estrogen receptor (ER) and progesterone receptor (PR) expression, and human epidermal growth factor receptor 2 (HER2) overexpression that lacks targeted treatments, leading to dismal clinical outcomes. Thus, better stratification systems that reflect intrinsic and clinically useful differences between TNBC tumors will sharpen the treatment approaches and improve clinical outcomes. The lack of a rational classification system for TNBC also impacts current and emerging therapeutic alternatives. In the past years, several new methodologies to stratify TNBC have arisen thanks to the implementation of microarray technology, high-throughput sequencing, and bioinformatic methods, exponentially increasing the amount of genomic, epigenomic, transcriptomic, and proteomic information available. Thus, new TNBC subtypes are being characterized with the promise to advance the treatment of this challenging disease. However, the diverse nature of the molecular data, the poor integration between the various methods, and the lack of cost-effective methods for systematic classification have hampered the widespread implementation of these promising developments. However, the advent of artificial intelligence applied to translational oncology promises to bring light into definitive TNBC subtypes. This review provides a comprehensive summary of the available classification strategies. It includes evaluating the overlap between the molecular, immunohistochemical, and clinical characteristics between these approaches and a perspective about the increasing applications of artificial intelligence to identify definitive and clinically relevant TNBC subtypes.
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spelling doaj.art-02e9a0b4b26a4ea69a1f946dbd6bca0f2022-12-21T22:50:54ZengFrontiers Media S.A.Frontiers in Oncology2234-943X2021-06-011110.3389/fonc.2021.681476681476Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast CancerMiquel Ensenyat-Mendez0Pere Llinàs-Arias1Javier I. J. Orozco2Sandra Íñiguez-Muñoz3Matthew P. Salomon4Borja Sesé5Maggie L. DiNome6Diego M. Marzese7Cancer Epigenetics Laboratory at the Cancer Cell Biology Group, Institut d’Investigació Sanitària Illes Balears (IdISBa), Palma, SpainCancer Epigenetics Laboratory at the Cancer Cell Biology Group, Institut d’Investigació Sanitària Illes Balears (IdISBa), Palma, SpainSaint John’s Cancer Institute, Providence Saint John’s Health Center, Santa Monica, CA, United StatesCancer Epigenetics Laboratory at the Cancer Cell Biology Group, Institut d’Investigació Sanitària Illes Balears (IdISBa), Palma, SpainKeck School of Medicine, University of Southern California, Los Angeles, CA, United StatesCancer Epigenetics Laboratory at the Cancer Cell Biology Group, Institut d’Investigació Sanitària Illes Balears (IdISBa), Palma, SpainDepartment of Surgery, David Geffen School of Medicine, University California Los Angeles (UCLA), Los Angeles, CA, United StatesCancer Epigenetics Laboratory at the Cancer Cell Biology Group, Institut d’Investigació Sanitària Illes Balears (IdISBa), Palma, SpainTriple-negative breast cancer (TNBC) is a highly heterogeneous disease defined by the absence of estrogen receptor (ER) and progesterone receptor (PR) expression, and human epidermal growth factor receptor 2 (HER2) overexpression that lacks targeted treatments, leading to dismal clinical outcomes. Thus, better stratification systems that reflect intrinsic and clinically useful differences between TNBC tumors will sharpen the treatment approaches and improve clinical outcomes. The lack of a rational classification system for TNBC also impacts current and emerging therapeutic alternatives. In the past years, several new methodologies to stratify TNBC have arisen thanks to the implementation of microarray technology, high-throughput sequencing, and bioinformatic methods, exponentially increasing the amount of genomic, epigenomic, transcriptomic, and proteomic information available. Thus, new TNBC subtypes are being characterized with the promise to advance the treatment of this challenging disease. However, the diverse nature of the molecular data, the poor integration between the various methods, and the lack of cost-effective methods for systematic classification have hampered the widespread implementation of these promising developments. However, the advent of artificial intelligence applied to translational oncology promises to bring light into definitive TNBC subtypes. This review provides a comprehensive summary of the available classification strategies. It includes evaluating the overlap between the molecular, immunohistochemical, and clinical characteristics between these approaches and a perspective about the increasing applications of artificial intelligence to identify definitive and clinically relevant TNBC subtypes.https://www.frontiersin.org/articles/10.3389/fonc.2021.681476/fulltriple-negative breast cancerTNBCmolecular subtype of breast cancerepigeneticsclusteringartificial intelligence-AI
spellingShingle Miquel Ensenyat-Mendez
Pere Llinàs-Arias
Javier I. J. Orozco
Sandra Íñiguez-Muñoz
Matthew P. Salomon
Borja Sesé
Maggie L. DiNome
Diego M. Marzese
Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer
Frontiers in Oncology
triple-negative breast cancer
TNBC
molecular subtype of breast cancer
epigenetics
clustering
artificial intelligence-AI
title Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer
title_full Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer
title_fullStr Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer
title_full_unstemmed Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer
title_short Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer
title_sort current triple negative breast cancer subtypes dissecting the most aggressive form of breast cancer
topic triple-negative breast cancer
TNBC
molecular subtype of breast cancer
epigenetics
clustering
artificial intelligence-AI
url https://www.frontiersin.org/articles/10.3389/fonc.2021.681476/full
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