Editorial: Sequencing and phylogenetic analysis as a tool in molecular epidemiology of veterinary infectious diseases

Editorial: Sequencing and phylogenetic analysis as a tool in molecular epidemiology of veterinary infectious diseases

Bibliographic Details
Main Authors:	Christina M. Leyson, Moh A. Alkhamis, Iryna V. Goraichuk
Format:	Article
Language:	English
Published:	Frontiers Media S.A. 2023-07-01
Series:	Frontiers in Veterinary Science
Subjects:	genome sequencing next-generation sequencing sanger sequencing phylogenetic analysis metagenomics molecular surveillance
Online Access:	https://www.frontiersin.org/articles/10.3389/fvets.2023.1236155/full

Similar Items

Next generation sequencing (NGS): a golden tool in forensic toolkit
by: Sanaa M. Aly, et al.
Published: (2016-07-01)

First mitochondrial genome of Lutjanus ehrenbergii_ Peters 1869 (Lutjaniformes: Lutjanidae: Lutjanus) and phylogenetic analysis
by: Zengliang Miao, et al.
Published: (2025-01-01)

AB12PHYLO: An Integrated Pipeline for Maximum Likelihood Phylogenetic Inference from ABI Trace Data
by: Leo Kaindl, et al.
Published: (2022-06-01)

DEVELOPMENT OF NEW SEQUENCING TECHNOLOGIES AND THEIR APPLICATION IN GENOME ANALYSIS OF DOMESTIC ANIMALS
by: Kristina Gvozdanović, et al.
Published: (2015-12-01)

Sequencing Analysis and Phylogenetic Tree of HPV Isolated from Breast Cancer Patients at Thi-Qar Province/Iraq
by: Bushra Jabbar Hamad, et al.
Published: (2020-12-01)

Application of next-generation sequencing to identify different pathogens
by: Aljuboori M. Nafea, et al.
Published: (2024-01-01)

Improved influenza A whole-genome sequencing protocol
by: Iryna V. Goraichuk, et al.
Published: (2024-11-01)

Added Value of Next Generation over Sanger Sequencing in Kenyan Youth with Extensive HIV-1 Drug Resistance
by: V. Novitsky, et al.
Published: (2022-12-01)

Will long-read sequencing technologies replace short-read sequencing technologies in the next 10 years?
by: Boluwatife A. Adewale
Published: (2020-11-01)

A Review of Next Generation Sequencing Methods and its Applications in Laboratory Diagnosis
by: Srivalsa Bhaskaran, et al.
Published: (2022-06-01)

HIV Drug Resistance Mutations Detection by Next-Generation Sequencing during Antiretroviral Therapy Interruption in China
by: Miaomiao Li, et al.
Published: (2021-02-01)

The 28S rRNA RT-qPCR assay for host depletion evaluation to enhance avian virus detection in Illumina and Nanopore sequencing
by: Iryna V. Goraichuk, et al.
Published: (2024-01-01)

Preliminary assessment of nanopore-based metagenomic sequencing for the diagnosis of prosthetic joint infection
by: Chao-xin Wang, et al.
Published: (2020-08-01)

Non-Targeted RNA Sequencing: Towards the Development of Universal Clinical Diagnosis Methods for Human and Veterinary Infectious Diseases
by: Stephen Spatz, et al.
Published: (2024-05-01)

Targeted NGS: a cost effective approach to molecular diagnosis of PIDs
by: Jennifer eStoddard, et al.
Published: (2014-11-01)

PHYLOGENETIC ANALYSIS OF TWELVE BULGARIAN SEQUENCES BASED ON PARTIAL OPEN READING FRAME 2 GENOME FRAGMENT OF HEPATITIS E VIRUS
by: Chiydem Ismailova, et al.
Published: (2024-05-01)

HIV-1 Drug Resistance Genotyping in Resource Limited Settings: Current and Future Perspectives in Sequencing Technologies
by: Sontaga Manyana, et al.
Published: (2021-06-01)

Application of a Sanger-Based External Quality Assurance Strategy for the Transition of HIV-1 Drug Resistance Assays to Next Generation Sequencing
by: Cheryl Jennings, et al.
Published: (2020-12-01)

SOAPTyping: an open-source and cross-platform tool for sequence-based typing for HLA class I and II alleles
by: Yong Zhang, et al.
Published: (2020-07-01)

A Python script to merge Sanger sequences
by: Cen Chen, et al.
Published: (2021-04-01)

Molecular and phylogenetic datasets for the Asterophryinae frogs of New Guinea with additional data on lifestyle, geography, and elevation
by: Ethan C. Hill, et al.
Published: (2023-04-01)

Improving Bacterial Metagenomic Research through Long-Read Sequencing
by: Noah Greenman, et al.
Published: (2024-05-01)

Equine Histoplasmosis in Ethiopia: Phylogenetic Analysis by Sequencing of the Internal Transcribed Spacer Region of rRNA Genes
by: Gobena Ameni, et al.
Published: (2022-07-01)

Unveiling the microbial symphony: Next-Gen sequencing and bioinformatics insights into the human gut microbiome
by: Keerti Maheshwari, et al.
Published: (2024-06-01)

The complete mitogenome of Qingyuan chicken (Gallus gallus) by next-generation sequencing and phylogenetic analysis
by: Jingjing Gu, et al.
Published: (2020-07-01)

Towards next-generation sequencing for HIV-1 drug resistance testing in a clinical setting
by: Teo, Calesta Hui Yi, et al.
Published: (2023)

Clinical Performance of Nanopore Targeted Sequencing for Diagnosing Infectious Diseases
by: Yu Fu, et al.
Published: (2022-04-01)

Targeted Gene Sanger Sequencing Should Remain the First-Tier Genetic Test for Children Suspected to Have the Five Common X-Linked Inborn Errors of Immunity
by: Koon-Wing Chan, et al.
Published: (2022-07-01)

Application of third-generation sequencing technology for identifying rare α- and β-globin gene variants in a Southeast Chinese region
by: Jianlong Zhuang, et al.
Published: (2024-10-01)

Towards Next-Generation Sequencing for HIV-1 Drug Resistance Testing in a Clinical Setting
by: Calesta Hui Yi Teo, et al.
Published: (2022-10-01)

Assessment of Viral Targeted Sequence Capture Using Nanopore Sequencing Directly from Clinical Samples
by: Leonard Schuele, et al.
Published: (2020-11-01)

Introduction of Avian metapneumovirus subtype A to the United States: molecular insights and implications
by: Iryna V. Goraichuk, et al.
Published: (2024-07-01)

Genomic surveillance of SARS-CoV-2 by sequencing the RBD region using Sanger sequencing from North Kerala
by: Dhananjayan Dhanasooraj, et al.
Published: (2022-08-01)

Transcriptome sequencing and SNP detection in Phoebe chekiangensis
by: Bing He, et al.
Published: (2017-05-01)

Rapid DNA Sequencing Technology Based on the Sanger Method for Bacterial Identification
by: Shunsuke Furutani, et al.
Published: (2022-03-01)

Metagenomic Next-Generation Sequencing for Diagnosis of Infectious Encephalitis and Meningitis: A Large, Prospective Case Series of 213 Patients
by: Xiao-Wei Xing, et al.
Published: (2020-03-01)

A Python program to merge Sanger sequences: an update
by: Shiming Lin, et al.
Published: (2024-10-01)

Metagenomic Next-generation Sequencing: Current Status, Challenges and Prospects of Clinical Application
by: DIAO Zhenli, et al.
Published: (2023-09-01)

Simple protocol for population (Sanger) sequencing for Zika virus genomic regions
by: Gabriela Bastos Cabral, et al.
Published: (2017-11-01)

Utilizing metagenomic next-generation sequencing and phylogenetic analysis to identify a rare pediatric case of Naegleria fowleri infection presenting with fulminant myocarditis
by: Liangkang Lin, et al.
Published: (2024-11-01)