The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’
The peach (Prunus persica L. Batsch) is one of the important stone fruit crops in the Crimea Peninsula and the southern part of Russia. The complete chloroplast genome of the peach cultivar ‘Sovetskiy’ is published in this paper. The chloroplast genome size is 157,756 bp. It contains 126 genes, incl...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-10-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1972861 |
| _version_ | 1827772347083390976 |
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| author | Fedor Sharko Maria Gladysheva-Azgari Svetlana Tsygankova Irina Mitrofanova Eugenia Boulygina Natalia Slobodova Anatoliy Smykov Sergey Rastorguev Artem Nedoluzhko |
| author_facet | Fedor Sharko Maria Gladysheva-Azgari Svetlana Tsygankova Irina Mitrofanova Eugenia Boulygina Natalia Slobodova Anatoliy Smykov Sergey Rastorguev Artem Nedoluzhko |
| author_sort | Fedor Sharko |
| collection | DOAJ |
| description | The peach (Prunus persica L. Batsch) is one of the important stone fruit crops in the Crimea Peninsula and the southern part of Russia. The complete chloroplast genome of the peach cultivar ‘Sovetskiy’ is published in this paper. The chloroplast genome size is 157,756 bp. It contains 126 genes, including 81 protein-coding genes (PCGs), eight ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. The chloroplast genome also contains a large single-copy region of 85,960 bp, a small single-copy (SSC) region of 19,045 bp, and two inverted repeats regions of 26,375 bp and 26,372 bp. The overall base composition of the genome in descending order is 31.2% – A, 32.1% – T, 18.7% – C, and 18.0% – G. The total GC content of the chloroplast genome is 36.7%. Maximum-likelihood phylogenetic analysis involving nine chloroplast genomes of the Prunus genus revealed a separate cluster for P. persica and its possible landrace – P. ferganensis. |
| first_indexed | 2024-03-11T13:07:06Z |
| format | Article |
| id | doaj.art-039553b974f74481bf7d311d656292b7 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:07:06Z |
| publishDate | 2021-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-039553b974f74481bf7d311d656292b72023-11-03T14:28:30ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-10-016102882288310.1080/23802359.2021.19728611972861The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’Fedor Sharko0Maria Gladysheva-Azgari1Svetlana Tsygankova2Irina Mitrofanova3Eugenia Boulygina4Natalia Slobodova5Anatoliy Smykov6Sergey Rastorguev7Artem Nedoluzhko8National Research Center “Kurchatov Institute”National Research Center “Kurchatov Institute”National Research Center “Kurchatov Institute”Nikita Botanical Gardens – National Scientific Centre of the Russian Academy of SciencesNational Research Center “Kurchatov Institute”National Research Center “Kurchatov Institute”Nikita Botanical Gardens – National Scientific Centre of the Russian Academy of SciencesNational Research Center “Kurchatov Institute”Faculty of Biosciences and Aquaculture, Nord UniversityThe peach (Prunus persica L. Batsch) is one of the important stone fruit crops in the Crimea Peninsula and the southern part of Russia. The complete chloroplast genome of the peach cultivar ‘Sovetskiy’ is published in this paper. The chloroplast genome size is 157,756 bp. It contains 126 genes, including 81 protein-coding genes (PCGs), eight ribosomal RNA (rRNA) genes, and 37 transfer RNA (tRNA) genes. The chloroplast genome also contains a large single-copy region of 85,960 bp, a small single-copy (SSC) region of 19,045 bp, and two inverted repeats regions of 26,375 bp and 26,372 bp. The overall base composition of the genome in descending order is 31.2% – A, 32.1% – T, 18.7% – C, and 18.0% – G. The total GC content of the chloroplast genome is 36.7%. Maximum-likelihood phylogenetic analysis involving nine chloroplast genomes of the Prunus genus revealed a separate cluster for P. persica and its possible landrace – P. ferganensis.http://dx.doi.org/10.1080/23802359.2021.1972861chloroplast genomepeachrosaceaeannotationnanopore sequencing |
| spellingShingle | Fedor Sharko Maria Gladysheva-Azgari Svetlana Tsygankova Irina Mitrofanova Eugenia Boulygina Natalia Slobodova Anatoliy Smykov Sergey Rastorguev Artem Nedoluzhko The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’ Mitochondrial DNA. Part B. Resources chloroplast genome peach rosaceae annotation nanopore sequencing |
| title | The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’ |
| title_full | The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’ |
| title_fullStr | The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’ |
| title_full_unstemmed | The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’ |
| title_short | The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’ |
| title_sort | complete chloroplast genome sequence of cultivated prunus persica cv sovetskiy |
| topic | chloroplast genome peach rosaceae annotation nanopore sequencing |
| url | http://dx.doi.org/10.1080/23802359.2021.1972861 |
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