An ace up their sleeve: a transcriptomic approach exposes the AceI efflux protein of Acinetobacter baumannii and reveals the drug efflux potential hidden in many microbial pathogens

The era of antibiotics as a cure-all for bacterial infections appears to be coming to an end. The emergence of multidrug resistance in many hospital-associated pathogens has resulted in superbugs that are effectively untreatable. Multidrug efflux pumps are well known mediators of bacterial drug resi...

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Main Authors: Karl A Hassan, Liam DH Elbourne, Liping eLi, Hasinika KA Hewawasam Gamage, Qi eLiu, Scott M Jackson, David eSharples, Anne-Brit eKolstø, Peter JF Henderson, Ian T Paulsen
Format: Article
Language:English
Published: Frontiers Media S.A. 2015-04-01
Series:Frontiers in Microbiology
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.00333/full
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author Karl A Hassan
Liam DH Elbourne
Liping eLi
Hasinika KA Hewawasam Gamage
Qi eLiu
Scott M Jackson
David eSharples
Anne-Brit eKolstø
Peter JF Henderson
Ian T Paulsen
author_facet Karl A Hassan
Liam DH Elbourne
Liping eLi
Hasinika KA Hewawasam Gamage
Qi eLiu
Scott M Jackson
David eSharples
Anne-Brit eKolstø
Peter JF Henderson
Ian T Paulsen
author_sort Karl A Hassan
collection DOAJ
description The era of antibiotics as a cure-all for bacterial infections appears to be coming to an end. The emergence of multidrug resistance in many hospital-associated pathogens has resulted in superbugs that are effectively untreatable. Multidrug efflux pumps are well known mediators of bacterial drug resistance. Genome sequencing efforts have highlighted an abundance of putative efflux pump genes in bacteria. However, it is not clear how many of these pumps play a role in antimicrobial resistance. Several studies have demonstrated that efflux pump genes that participate in drug resistance are typically under tight regulatory control and expressed only in response to their substrates. Consequently, changes in gene expression following antimicrobial shock treatments may be used to identify efflux pumps that mediate antimicrobial resistance, informing targeted functional analyses of these proteins. Using this approach we have characterised novel efflux pumps in both Gram-negative and Gram-positive bacteria. Notably, we recently applied this strategy to characterise the AceI efflux pump from Acinetobacter. AceI is a prototype for a new family of multidrug efflux proteins that is conserved across many proteobacterial lineages. Different efflux pumps in this family have been shown to confer resistance to biocides including chlorhexidine, dequalinium, benzalkonium, proflavine and/or acriflavine. The discovery of this novel family of multidrug efflux proteins raises the possibility that additional undiscovered intrinsic resistance proteins may be encoded in the core genomes of pathogenic bacteria.
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spelling doaj.art-0489472634e24edd85ad5e310fbaaadc2022-12-22T01:36:39ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2015-04-01610.3389/fmicb.2015.00333138007An ace up their sleeve: a transcriptomic approach exposes the AceI efflux protein of Acinetobacter baumannii and reveals the drug efflux potential hidden in many microbial pathogensKarl A Hassan0Liam DH Elbourne1Liping eLi2Hasinika KA Hewawasam Gamage3Qi eLiu4Scott M Jackson5David eSharples6Anne-Brit eKolstø7Peter JF Henderson8Ian T Paulsen9Macquarie UniversityMacquarie UniversityMacquarie UniversityMacquarie UniversityMacquarie UniversityUniversity of LeedsUniversity of LeedsUniversity of OsloUniversity of LeedsMacquarie UniversityThe era of antibiotics as a cure-all for bacterial infections appears to be coming to an end. The emergence of multidrug resistance in many hospital-associated pathogens has resulted in superbugs that are effectively untreatable. Multidrug efflux pumps are well known mediators of bacterial drug resistance. Genome sequencing efforts have highlighted an abundance of putative efflux pump genes in bacteria. However, it is not clear how many of these pumps play a role in antimicrobial resistance. Several studies have demonstrated that efflux pump genes that participate in drug resistance are typically under tight regulatory control and expressed only in response to their substrates. Consequently, changes in gene expression following antimicrobial shock treatments may be used to identify efflux pumps that mediate antimicrobial resistance, informing targeted functional analyses of these proteins. Using this approach we have characterised novel efflux pumps in both Gram-negative and Gram-positive bacteria. Notably, we recently applied this strategy to characterise the AceI efflux pump from Acinetobacter. AceI is a prototype for a new family of multidrug efflux proteins that is conserved across many proteobacterial lineages. Different efflux pumps in this family have been shown to confer resistance to biocides including chlorhexidine, dequalinium, benzalkonium, proflavine and/or acriflavine. The discovery of this novel family of multidrug efflux proteins raises the possibility that additional undiscovered intrinsic resistance proteins may be encoded in the core genomes of pathogenic bacteria.http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.00333/fullTranscriptomicsmultidrug efflux systemsBacterial drug resistanceAdaptive resistancebacterial transmembrane pair
spellingShingle Karl A Hassan
Liam DH Elbourne
Liping eLi
Hasinika KA Hewawasam Gamage
Qi eLiu
Scott M Jackson
David eSharples
Anne-Brit eKolstø
Peter JF Henderson
Ian T Paulsen
An ace up their sleeve: a transcriptomic approach exposes the AceI efflux protein of Acinetobacter baumannii and reveals the drug efflux potential hidden in many microbial pathogens
Frontiers in Microbiology
Transcriptomics
multidrug efflux systems
Bacterial drug resistance
Adaptive resistance
bacterial transmembrane pair
title An ace up their sleeve: a transcriptomic approach exposes the AceI efflux protein of Acinetobacter baumannii and reveals the drug efflux potential hidden in many microbial pathogens
title_full An ace up their sleeve: a transcriptomic approach exposes the AceI efflux protein of Acinetobacter baumannii and reveals the drug efflux potential hidden in many microbial pathogens
title_fullStr An ace up their sleeve: a transcriptomic approach exposes the AceI efflux protein of Acinetobacter baumannii and reveals the drug efflux potential hidden in many microbial pathogens
title_full_unstemmed An ace up their sleeve: a transcriptomic approach exposes the AceI efflux protein of Acinetobacter baumannii and reveals the drug efflux potential hidden in many microbial pathogens
title_short An ace up their sleeve: a transcriptomic approach exposes the AceI efflux protein of Acinetobacter baumannii and reveals the drug efflux potential hidden in many microbial pathogens
title_sort ace up their sleeve a transcriptomic approach exposes the acei efflux protein of acinetobacter baumannii and reveals the drug efflux potential hidden in many microbial pathogens
topic Transcriptomics
multidrug efflux systems
Bacterial drug resistance
Adaptive resistance
bacterial transmembrane pair
url http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.00333/full
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