The complete chloroplast genome sequence of Phalaenopsis wilsonii Rolfe, a vulnerable wild moth orchid species (Orchidaceae)
Phalaenopsis wilsonii Rolfe is a vulnerable wild moth orchid species with important horticultural value. The complete chloroplast genome sequence of P. wilsonii was generated by de novo assembly using whole genome next-generation sequencing to provide genomic data for further conservation genetics,...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-10-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1923420 |
| _version_ | 1797638840041603072 |
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| author | Zhi-Feng Fan Da-Yong Yu Chang-Le Ma |
| author_facet | Zhi-Feng Fan Da-Yong Yu Chang-Le Ma |
| author_sort | Zhi-Feng Fan |
| collection | DOAJ |
| description | Phalaenopsis wilsonii Rolfe is a vulnerable wild moth orchid species with important horticultural value. The complete chloroplast genome sequence of P. wilsonii was generated by de novo assembly using whole genome next-generation sequencing to provide genomic data for further conservation genetics, phylogeny and molecular breeding in Phalaenopsis. The complete plastome of P. wilsonii is 145,096 bp in length, containing two inverted repeats (IR) regions (24,787 bp), a large single-copy (LSC) region (84,688 bp), and a small single-copy (SSC) region (10,834 bp). The chloroplast genome encoded 119 unique genes, including 73 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The overall GC content of the whole genome is 36.9%. Phylogenetic analysis indicated P. wilsonii was closely related to P. lowii. |
| first_indexed | 2024-03-11T13:09:11Z |
| format | Article |
| id | doaj.art-04973ae41ecc45aa90188e53f243da3b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:09:11Z |
| publishDate | 2021-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-04973ae41ecc45aa90188e53f243da3b2023-11-03T14:16:10ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-10-016102903290510.1080/23802359.2021.19234201923420The complete chloroplast genome sequence of Phalaenopsis wilsonii Rolfe, a vulnerable wild moth orchid species (Orchidaceae)Zhi-Feng Fan0Da-Yong Yu1Chang-Le Ma2School of Landscape Architecture and Horticulture Sciences, Southwest Forestry UniversitySchool of Landscape Architecture and Horticulture Sciences, Southwest Forestry UniversitySchool of Landscape Architecture and Horticulture Sciences, Southwest Forestry UniversityPhalaenopsis wilsonii Rolfe is a vulnerable wild moth orchid species with important horticultural value. The complete chloroplast genome sequence of P. wilsonii was generated by de novo assembly using whole genome next-generation sequencing to provide genomic data for further conservation genetics, phylogeny and molecular breeding in Phalaenopsis. The complete plastome of P. wilsonii is 145,096 bp in length, containing two inverted repeats (IR) regions (24,787 bp), a large single-copy (LSC) region (84,688 bp), and a small single-copy (SSC) region (10,834 bp). The chloroplast genome encoded 119 unique genes, including 73 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The overall GC content of the whole genome is 36.9%. Phylogenetic analysis indicated P. wilsonii was closely related to P. lowii.http://dx.doi.org/10.1080/23802359.2021.1923420phalaenopsis wilsoniichloroplast genomebreeding parentphylogenetic analysis |
| spellingShingle | Zhi-Feng Fan Da-Yong Yu Chang-Le Ma The complete chloroplast genome sequence of Phalaenopsis wilsonii Rolfe, a vulnerable wild moth orchid species (Orchidaceae) Mitochondrial DNA. Part B. Resources phalaenopsis wilsonii chloroplast genome breeding parent phylogenetic analysis |
| title | The complete chloroplast genome sequence of Phalaenopsis wilsonii Rolfe, a vulnerable wild moth orchid species (Orchidaceae) |
| title_full | The complete chloroplast genome sequence of Phalaenopsis wilsonii Rolfe, a vulnerable wild moth orchid species (Orchidaceae) |
| title_fullStr | The complete chloroplast genome sequence of Phalaenopsis wilsonii Rolfe, a vulnerable wild moth orchid species (Orchidaceae) |
| title_full_unstemmed | The complete chloroplast genome sequence of Phalaenopsis wilsonii Rolfe, a vulnerable wild moth orchid species (Orchidaceae) |
| title_short | The complete chloroplast genome sequence of Phalaenopsis wilsonii Rolfe, a vulnerable wild moth orchid species (Orchidaceae) |
| title_sort | complete chloroplast genome sequence of phalaenopsis wilsonii rolfe a vulnerable wild moth orchid species orchidaceae |
| topic | phalaenopsis wilsonii chloroplast genome breeding parent phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1923420 |
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