Association of variations in HLA class II and other loci with susceptibility to EGFR-mutated lung adenocarcinoma

EGFR mutations in lung adenocarcinoma are more frequent in East Asians compared to other populations. Here, the authors carry out a genome-wide association study in EGFRmutant cancers and identify loci that are associated with risk of developing this molecular subtype of cancer.

Bibliographic Details
Main Authors: Kouya Shiraishi, Yukinori Okada, Atsushi Takahashi, Yoichiro Kamatani, Yukihide Momozawa, Kyota Ashikawa, Hideo Kunitoh, Shingo Matsumoto, Atsushi Takano, Kimihiro Shimizu, Akiteru Goto, Koji Tsuta, Shun-ichi Watanabe, Yuichiro Ohe, Yukio Watanabe, Yasushi Goto, Hiroshi Nokihara, Koh Furuta, Akihiko Yoshida, Koichi Goto, Tomoyuki Hishida, Masahiro Tsuboi, Katsuya Tsuchihara, Yohei Miyagi, Haruhiko Nakayama, Tomoyuki Yokose, Kazumi Tanaka, Toshiteru Nagashima, Yoichi Ohtaki, Daichi Maeda, Kazuhiro Imai, Yoshihiro Minamiya, Hiromi Sakamoto, Akira Saito, Yoko Shimada, Kuniko Sunami, Motonobu Saito, Johji Inazawa, Yusuke Nakamura, Teruhiko Yoshida, Jun Yokota, Fumihiko Matsuda, Keitaro Matsuo, Yataro Daigo, Michiaki Kubo, Takashi Kohno
Format: Article
Language:English
Published: Nature Portfolio 2016-08-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/ncomms12451
_version_ 1819129763501965312
author Kouya Shiraishi
Yukinori Okada
Atsushi Takahashi
Yoichiro Kamatani
Yukihide Momozawa
Kyota Ashikawa
Hideo Kunitoh
Shingo Matsumoto
Atsushi Takano
Kimihiro Shimizu
Akiteru Goto
Koji Tsuta
Shun-ichi Watanabe
Yuichiro Ohe
Yukio Watanabe
Yasushi Goto
Hiroshi Nokihara
Koh Furuta
Akihiko Yoshida
Koichi Goto
Tomoyuki Hishida
Masahiro Tsuboi
Katsuya Tsuchihara
Yohei Miyagi
Haruhiko Nakayama
Tomoyuki Yokose
Kazumi Tanaka
Toshiteru Nagashima
Yoichi Ohtaki
Daichi Maeda
Kazuhiro Imai
Yoshihiro Minamiya
Hiromi Sakamoto
Akira Saito
Yoko Shimada
Kuniko Sunami
Motonobu Saito
Johji Inazawa
Yusuke Nakamura
Teruhiko Yoshida
Jun Yokota
Fumihiko Matsuda
Keitaro Matsuo
Yataro Daigo
Michiaki Kubo
Takashi Kohno
author_facet Kouya Shiraishi
Yukinori Okada
Atsushi Takahashi
Yoichiro Kamatani
Yukihide Momozawa
Kyota Ashikawa
Hideo Kunitoh
Shingo Matsumoto
Atsushi Takano
Kimihiro Shimizu
Akiteru Goto
Koji Tsuta
Shun-ichi Watanabe
Yuichiro Ohe
Yukio Watanabe
Yasushi Goto
Hiroshi Nokihara
Koh Furuta
Akihiko Yoshida
Koichi Goto
Tomoyuki Hishida
Masahiro Tsuboi
Katsuya Tsuchihara
Yohei Miyagi
Haruhiko Nakayama
Tomoyuki Yokose
Kazumi Tanaka
Toshiteru Nagashima
Yoichi Ohtaki
Daichi Maeda
Kazuhiro Imai
Yoshihiro Minamiya
Hiromi Sakamoto
Akira Saito
Yoko Shimada
Kuniko Sunami
Motonobu Saito
Johji Inazawa
Yusuke Nakamura
Teruhiko Yoshida
Jun Yokota
Fumihiko Matsuda
Keitaro Matsuo
Yataro Daigo
Michiaki Kubo
Takashi Kohno
author_sort Kouya Shiraishi
collection DOAJ
description EGFR mutations in lung adenocarcinoma are more frequent in East Asians compared to other populations. Here, the authors carry out a genome-wide association study in EGFRmutant cancers and identify loci that are associated with risk of developing this molecular subtype of cancer.
first_indexed 2024-12-22T08:48:53Z
format Article
id doaj.art-06abe374e88a4c0f861cb8193ced8a5f
institution Directory Open Access Journal
issn 2041-1723
language English
last_indexed 2024-12-22T08:48:53Z
publishDate 2016-08-01
publisher Nature Portfolio
record_format Article
series Nature Communications
spelling doaj.art-06abe374e88a4c0f861cb8193ced8a5f2022-12-21T18:32:01ZengNature PortfolioNature Communications2041-17232016-08-01711710.1038/ncomms12451Association of variations in HLA class II and other loci with susceptibility to EGFR-mutated lung adenocarcinomaKouya Shiraishi0Yukinori Okada1Atsushi Takahashi2Yoichiro Kamatani3Yukihide Momozawa4Kyota Ashikawa5Hideo Kunitoh6Shingo Matsumoto7Atsushi Takano8Kimihiro Shimizu9Akiteru Goto10Koji Tsuta11Shun-ichi Watanabe12Yuichiro Ohe13Yukio Watanabe14Yasushi Goto15Hiroshi Nokihara16Koh Furuta17Akihiko Yoshida18Koichi Goto19Tomoyuki Hishida20Masahiro Tsuboi21Katsuya Tsuchihara22Yohei Miyagi23Haruhiko Nakayama24Tomoyuki Yokose25Kazumi Tanaka26Toshiteru Nagashima27Yoichi Ohtaki28Daichi Maeda29Kazuhiro Imai30Yoshihiro Minamiya31Hiromi Sakamoto32Akira Saito33Yoko Shimada34Kuniko Sunami35Motonobu Saito36Johji Inazawa37Yusuke Nakamura38Teruhiko Yoshida39Jun Yokota40Fumihiko Matsuda41Keitaro Matsuo42Yataro Daigo43Michiaki Kubo44Takashi Kohno45Division of Genome Biology, National Cancer Center Research InstituteDepartment of Human Genetics and Disease Diversity, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental UniversityLaboratory for Statistical Analysis, RIKEN Center for Integrative Medical SciencesLaboratory for Statistical Analysis, RIKEN Center for Integrative Medical SciencesLaboratory for Genotyping Development, Center for Integrative Medical Sciences, RIKENLaboratory for Genotyping Development, Center for Integrative Medical Sciences, RIKENDepartment of Medical Oncology, Japanese Red Cross Medical CenterDivision of Translational Research, Exploratory Oncology Research and Clinical Trial Center (EPOC), National Cancer Center Research InstituteCenter for Antibody and Vaccine Therapy, Research Hospital, Institute of Medical Science, The University of TokyoDepartment of Integrative Center of General Surgery, Gunma University HospitalDepartment of Cellular and Organ Pathology, Graduate School of Medicine, Akita UniversityDepartment of Pathology, National Cancer Center HospitalDivision of Thoracic Surgery, National Cancer Centre HospitalDepartment of Thoracic Oncology, National Cancer Center HospitalDivision of Thoracic Surgery, National Cancer Centre HospitalDepartment of Thoracic Oncology, National Cancer Center HospitalDepartment of Thoracic Oncology, National Cancer Center HospitalDepartment of Clinical Laboratories, National Cancer Center HospitalDepartment of Pathology, National Cancer Center HospitalDepartment of Thoracic Oncology, National Cancer Center Hospital EastDepartment of Thoracic Surgery, National Cancer Center Hospital EastDepartment of Thoracic Surgery, National Cancer Center Hospital EastDivision of Translational Research, Exploratory Oncology Research and Clinical Trial Center (EPOC), National Cancer Center Research InstituteMolecular Pathology and Genetics Division, Kanagawa Cancer Center Research InstituteDepartment of Thoracic Surgery, Kanagawa Cancer CenterDepartment of Pathology, Kanagawa Cancer CenterDepartment of Integrative Center of General Surgery, Gunma University HospitalDepartment of Integrative Center of General Surgery, Gunma University HospitalDepartment of Integrative Center of General Surgery, Gunma University HospitalDepartment of Cellular and Organ Pathology, Graduate School of Medicine, Akita UniversityDepartment of Thoracic Surgery, Graduate School of Medicine, Akita UniversityDepartment of Thoracic Surgery, Graduate School of Medicine, Akita UniversityDivision of Genetics, National Cancer Center Research InstituteStaGen Co., Ltd.Division of Genome Biology, National Cancer Center Research InstituteDivision of Genome Biology, National Cancer Center Research InstituteDivision of Genome Biology, National Cancer Center Research InstituteDepartment of Molecular Cytogenetics, Medical Research Institute, Tokyo Medical and Dental UniversityDepartment of Medicine and Department of Surgery, Center for Personalized Therapeutics, The University of ChicagoDivision of Genetics, National Cancer Center Research InstituteGenomics and Epigenomics of Cancer Prediction Program, Institute of Predictive and Personalized Medicine of Cancer (IMPPC)Center for Genomic Medicine, Graduate School of Medicine, Kyoto UniversityDivision of Division of Molecular Medicine, Aichi Cancer Center Research InstituteCenter for Antibody and Vaccine Therapy, Research Hospital, Institute of Medical Science, The University of TokyoLaboratory for Genotyping Development, Center for Integrative Medical Sciences, RIKENDivision of Genome Biology, National Cancer Center Research InstituteEGFR mutations in lung adenocarcinoma are more frequent in East Asians compared to other populations. Here, the authors carry out a genome-wide association study in EGFRmutant cancers and identify loci that are associated with risk of developing this molecular subtype of cancer.https://doi.org/10.1038/ncomms12451
spellingShingle Kouya Shiraishi
Yukinori Okada
Atsushi Takahashi
Yoichiro Kamatani
Yukihide Momozawa
Kyota Ashikawa
Hideo Kunitoh
Shingo Matsumoto
Atsushi Takano
Kimihiro Shimizu
Akiteru Goto
Koji Tsuta
Shun-ichi Watanabe
Yuichiro Ohe
Yukio Watanabe
Yasushi Goto
Hiroshi Nokihara
Koh Furuta
Akihiko Yoshida
Koichi Goto
Tomoyuki Hishida
Masahiro Tsuboi
Katsuya Tsuchihara
Yohei Miyagi
Haruhiko Nakayama
Tomoyuki Yokose
Kazumi Tanaka
Toshiteru Nagashima
Yoichi Ohtaki
Daichi Maeda
Kazuhiro Imai
Yoshihiro Minamiya
Hiromi Sakamoto
Akira Saito
Yoko Shimada
Kuniko Sunami
Motonobu Saito
Johji Inazawa
Yusuke Nakamura
Teruhiko Yoshida
Jun Yokota
Fumihiko Matsuda
Keitaro Matsuo
Yataro Daigo
Michiaki Kubo
Takashi Kohno
Association of variations in HLA class II and other loci with susceptibility to EGFR-mutated lung adenocarcinoma
Nature Communications
title Association of variations in HLA class II and other loci with susceptibility to EGFR-mutated lung adenocarcinoma
title_full Association of variations in HLA class II and other loci with susceptibility to EGFR-mutated lung adenocarcinoma
title_fullStr Association of variations in HLA class II and other loci with susceptibility to EGFR-mutated lung adenocarcinoma
title_full_unstemmed Association of variations in HLA class II and other loci with susceptibility to EGFR-mutated lung adenocarcinoma
title_short Association of variations in HLA class II and other loci with susceptibility to EGFR-mutated lung adenocarcinoma
title_sort association of variations in hla class ii and other loci with susceptibility to egfr mutated lung adenocarcinoma
url https://doi.org/10.1038/ncomms12451
work_keys_str_mv AT kouyashiraishi associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yukinoriokada associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT atsushitakahashi associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yoichirokamatani associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yukihidemomozawa associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT kyotaashikawa associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT hideokunitoh associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT shingomatsumoto associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT atsushitakano associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT kimihiroshimizu associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT akiterugoto associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT kojitsuta associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT shunichiwatanabe associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yuichiroohe associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yukiowatanabe associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yasushigoto associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT hiroshinokihara associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT kohfuruta associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT akihikoyoshida associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT koichigoto associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT tomoyukihishida associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT masahirotsuboi associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT katsuyatsuchihara associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yoheimiyagi associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT haruhikonakayama associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT tomoyukiyokose associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT kazumitanaka associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT toshiterunagashima associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yoichiohtaki associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT daichimaeda associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT kazuhiroimai associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yoshihirominamiya associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT hiromisakamoto associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT akirasaito associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yokoshimada associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT kunikosunami associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT motonobusaito associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT johjiinazawa associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yusukenakamura associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT teruhikoyoshida associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT junyokota associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT fumihikomatsuda associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT keitaromatsuo associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT yatarodaigo associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT michiakikubo associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma
AT takashikohno associationofvariationsinhlaclassiiandotherlociwithsusceptibilitytoegfrmutatedlungadenocarcinoma