Distinct Hepatic Gene‐Expression Patterns of NAFLD in Patients With Obesity

Approaches to manage nonalcoholic fatty liver disease (NAFLD) are limited by an incomplete understanding of disease pathogenesis. The aim of this study was to identify hepatic gene‐expression patterns associated with different patterns of liver injury in a high‐risk cohort of adults with obesity. Us...

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Main Authors: Sonu Subudhi, Hannah K. Drescher, Laura E. Dichtel, Lea M. Bartsch, Raymond T. Chung, Matthew M. Hutter, Denise W. Gee, Ozanan R. Meireles, Elan R. Witkowski, Louis Gelrud, Ricard Masia, Stephanie A. Osganian, Jenna L. Gustafson, Steve Rwema, Miriam A. Bredella, Sangeeta N. Bhatia, Andrew Warren, Karen K. Miller, Georg M. Lauer, Kathleen E. Corey
Format: Article
Language:English
Published: Wolters Kluwer Health/LWW 2022-01-01
Series:Hepatology Communications
Online Access:https://doi.org/10.1002/hep4.1789
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author Sonu Subudhi
Hannah K. Drescher
Laura E. Dichtel
Lea M. Bartsch
Raymond T. Chung
Matthew M. Hutter
Denise W. Gee
Ozanan R. Meireles
Elan R. Witkowski
Louis Gelrud
Ricard Masia
Stephanie A. Osganian
Jenna L. Gustafson
Steve Rwema
Miriam A. Bredella
Sangeeta N. Bhatia
Andrew Warren
Karen K. Miller
Georg M. Lauer
Kathleen E. Corey
author_facet Sonu Subudhi
Hannah K. Drescher
Laura E. Dichtel
Lea M. Bartsch
Raymond T. Chung
Matthew M. Hutter
Denise W. Gee
Ozanan R. Meireles
Elan R. Witkowski
Louis Gelrud
Ricard Masia
Stephanie A. Osganian
Jenna L. Gustafson
Steve Rwema
Miriam A. Bredella
Sangeeta N. Bhatia
Andrew Warren
Karen K. Miller
Georg M. Lauer
Kathleen E. Corey
author_sort Sonu Subudhi
collection DOAJ
description Approaches to manage nonalcoholic fatty liver disease (NAFLD) are limited by an incomplete understanding of disease pathogenesis. The aim of this study was to identify hepatic gene‐expression patterns associated with different patterns of liver injury in a high‐risk cohort of adults with obesity. Using the NanoString Technologies (Seattle, WA) nCounter assay, we quantified expression of 795 genes, hypothesized to be involved in hepatic fibrosis, inflammation, and steatosis, in liver tissue from 318 adults with obesity. Liver specimens were categorized into four distinct NAFLD phenotypes: normal liver histology (NLH), steatosis only (steatosis), nonalcoholic steatohepatitis without fibrosis (NASH F0), and NASH with fibrosis stage 1‐4 (NASH F1‐F4). One hundred twenty‐five genes were significantly increasing or decreasing as NAFLD pathology progressed. Compared with NLH, NASH F0 was characterized by increased inflammatory gene expression, such as gamma‐interferon‐inducible lysosomal thiol reductase (IFI30) and chemokine (C‐X‐C motif) ligand 9 (CXCL9), while complement and coagulation related genes, such as C9 and complement component 4 binding protein beta (C4BPB), were reduced. In the presence of NASH F1‐F4, extracellular matrix degrading proteinases and profibrotic/scar deposition genes, such as collagens and transforming growth factor beta 1 (TGFB1), were simultaneously increased, suggesting a dynamic state of tissue remodeling. Conclusion: In adults with obesity, distinct states of NAFLD are associated with intrahepatic perturbations in genes related to inflammation, complement and coagulation pathways, and tissue remodeling. These data provide insights into the dynamic pathogenesis of NAFLD in high‐risk individuals.
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spelling doaj.art-07b6bfd0733148bba1a4824406542c3f2023-02-02T08:35:47ZengWolters Kluwer Health/LWWHepatology Communications2471-254X2022-01-0161778910.1002/hep4.1789Distinct Hepatic Gene‐Expression Patterns of NAFLD in Patients With ObesitySonu Subudhi0Hannah K. Drescher1Laura E. Dichtel2Lea M. Bartsch3Raymond T. Chung4Matthew M. Hutter5Denise W. Gee6Ozanan R. Meireles7Elan R. Witkowski8Louis Gelrud9Ricard Masia10Stephanie A. Osganian11Jenna L. Gustafson12Steve Rwema13Miriam A. Bredella14Sangeeta N. Bhatia15Andrew Warren16Karen K. Miller17Georg M. Lauer18Kathleen E. Corey19Division of Gastroenterology Massachusetts General Hospital and Harvard Medical School Boston MA USADivision of Gastroenterology Massachusetts General Hospital and Harvard Medical School Boston MA USANeuroendocrine Unit, Massachusetts General Hospital and Harvard Medical School Boston MA USADivision of Gastroenterology Massachusetts General Hospital and Harvard Medical School Boston MA USADivision of Gastroenterology Massachusetts General Hospital and Harvard Medical School Boston MA USADepartment of Surgery Massachusetts General Hospital and Harvard Medical School Boston MA USADepartment of Surgery Massachusetts General Hospital and Harvard Medical School Boston MA USADepartment of Surgery Massachusetts General Hospital and Harvard Medical School Boston MA USADepartment of Surgery Massachusetts General Hospital and Harvard Medical School Boston MA USADepartment of Medicine St. Mary’s Hospital Bon Secours Richmond VA USADepartment of Pathology Massachusetts General Hospital and Harvard Medical School Boston MA USADivision of Gastroenterology Massachusetts General Hospital and Harvard Medical School Boston MA USADivision of Gastroenterology Massachusetts General Hospital and Harvard Medical School Boston MA USADivision of Gastroenterology Massachusetts General Hospital and Harvard Medical School Boston MA USADivision of Musculoskeletal Radiology and Interventions Department of Radiology Massachusetts General Hospital and Harvard Medical School Boston MA USALudwig Center for Molecular Oncology Massachusetts Institute of Technology Cambridge MA USALudwig Center for Molecular Oncology Massachusetts Institute of Technology Cambridge MA USANeuroendocrine Unit, Massachusetts General Hospital and Harvard Medical School Boston MA USADivision of Gastroenterology Massachusetts General Hospital and Harvard Medical School Boston MA USADivision of Gastroenterology Massachusetts General Hospital and Harvard Medical School Boston MA USAApproaches to manage nonalcoholic fatty liver disease (NAFLD) are limited by an incomplete understanding of disease pathogenesis. The aim of this study was to identify hepatic gene‐expression patterns associated with different patterns of liver injury in a high‐risk cohort of adults with obesity. Using the NanoString Technologies (Seattle, WA) nCounter assay, we quantified expression of 795 genes, hypothesized to be involved in hepatic fibrosis, inflammation, and steatosis, in liver tissue from 318 adults with obesity. Liver specimens were categorized into four distinct NAFLD phenotypes: normal liver histology (NLH), steatosis only (steatosis), nonalcoholic steatohepatitis without fibrosis (NASH F0), and NASH with fibrosis stage 1‐4 (NASH F1‐F4). One hundred twenty‐five genes were significantly increasing or decreasing as NAFLD pathology progressed. Compared with NLH, NASH F0 was characterized by increased inflammatory gene expression, such as gamma‐interferon‐inducible lysosomal thiol reductase (IFI30) and chemokine (C‐X‐C motif) ligand 9 (CXCL9), while complement and coagulation related genes, such as C9 and complement component 4 binding protein beta (C4BPB), were reduced. In the presence of NASH F1‐F4, extracellular matrix degrading proteinases and profibrotic/scar deposition genes, such as collagens and transforming growth factor beta 1 (TGFB1), were simultaneously increased, suggesting a dynamic state of tissue remodeling. Conclusion: In adults with obesity, distinct states of NAFLD are associated with intrahepatic perturbations in genes related to inflammation, complement and coagulation pathways, and tissue remodeling. These data provide insights into the dynamic pathogenesis of NAFLD in high‐risk individuals.https://doi.org/10.1002/hep4.1789
spellingShingle Sonu Subudhi
Hannah K. Drescher
Laura E. Dichtel
Lea M. Bartsch
Raymond T. Chung
Matthew M. Hutter
Denise W. Gee
Ozanan R. Meireles
Elan R. Witkowski
Louis Gelrud
Ricard Masia
Stephanie A. Osganian
Jenna L. Gustafson
Steve Rwema
Miriam A. Bredella
Sangeeta N. Bhatia
Andrew Warren
Karen K. Miller
Georg M. Lauer
Kathleen E. Corey
Distinct Hepatic Gene‐Expression Patterns of NAFLD in Patients With Obesity
Hepatology Communications
title Distinct Hepatic Gene‐Expression Patterns of NAFLD in Patients With Obesity
title_full Distinct Hepatic Gene‐Expression Patterns of NAFLD in Patients With Obesity
title_fullStr Distinct Hepatic Gene‐Expression Patterns of NAFLD in Patients With Obesity
title_full_unstemmed Distinct Hepatic Gene‐Expression Patterns of NAFLD in Patients With Obesity
title_short Distinct Hepatic Gene‐Expression Patterns of NAFLD in Patients With Obesity
title_sort distinct hepatic gene expression patterns of nafld in patients with obesity
url https://doi.org/10.1002/hep4.1789
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