Improving Segmentation of 3D Retina Layers Based on Graph Theory Approach for Low Quality OCT Images

This paper presents signal processing aspects for automatic segmentation of retinal layers of the human eye. The paper draws attention to the problems that occur during the computer image processing of images obtained with the use of the Spectral Domain Optical Coherence Tomography (SD OCT). Accurac...

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Main Authors: Stankiewicz Agnieszka, Marciniak Tomasz, Dąbrowski Adam, Stopa Marcin, Rakowicz Piotr, Marciniak Elżbieta
Format: Article
Language:English
Published: Polish Academy of Sciences 2016-06-01
Series:Metrology and Measurement Systems
Subjects:
Online Access:http://www.degruyter.com/view/j/mms.2016.23.issue-2/mms-2016-0016/mms-2016-0016.xml?format=INT
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author Stankiewicz Agnieszka
Marciniak Tomasz
Dąbrowski Adam
Stopa Marcin
Rakowicz Piotr
Marciniak Elżbieta
author_facet Stankiewicz Agnieszka
Marciniak Tomasz
Dąbrowski Adam
Stopa Marcin
Rakowicz Piotr
Marciniak Elżbieta
author_sort Stankiewicz Agnieszka
collection DOAJ
description This paper presents signal processing aspects for automatic segmentation of retinal layers of the human eye. The paper draws attention to the problems that occur during the computer image processing of images obtained with the use of the Spectral Domain Optical Coherence Tomography (SD OCT). Accuracy of the retinal layer segmentation for a set of typical 3D scans with a rather low quality was shown. Some possible ways to improve quality of the final results are pointed out. The experimental studies were performed using the so-called B-scans obtained with the OCT Copernicus HR device.
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spelling doaj.art-0819510efcf2435c8fd7d7e3d21bcb392022-12-22T01:46:44ZengPolish Academy of SciencesMetrology and Measurement Systems2300-19412016-06-0123226928010.1515/mms-2016-0016mms-2016-0016Improving Segmentation of 3D Retina Layers Based on Graph Theory Approach for Low Quality OCT ImagesStankiewicz Agnieszka0Marciniak Tomasz1Dąbrowski Adam2Stopa Marcin3Rakowicz Piotr4Marciniak Elżbieta5Poznan University of Technology, Department of Computing, Piotrowo 3a, 60-965 Poznań, PolandPoznan University of Technology, Department of Computing, Piotrowo 3a, 60-965 Poznań, PolandPoznan University of Technology, Department of Computing, Piotrowo 3a, 60-965 Poznań, PolandPoznan University of Medical Sciences, Department of Optometry and Biology of Visual System, Rokietnicka 5D, 60-806 Poznań, PolandPoznan University of Medical Sciences, Department of Optometry and Biology of Visual System, Rokietnicka 5D, 60-806 Poznań, PolandPoznan University of Medical Sciences, Clinical Eye Unit and Pediatric Ophthalmology Service Heliodor Swiecicki University Hospital, Grunwaldzka 16/18, 60-780 Poznań, PolandThis paper presents signal processing aspects for automatic segmentation of retinal layers of the human eye. The paper draws attention to the problems that occur during the computer image processing of images obtained with the use of the Spectral Domain Optical Coherence Tomography (SD OCT). Accuracy of the retinal layer segmentation for a set of typical 3D scans with a rather low quality was shown. Some possible ways to improve quality of the final results are pointed out. The experimental studies were performed using the so-called B-scans obtained with the OCT Copernicus HR device.http://www.degruyter.com/view/j/mms.2016.23.issue-2/mms-2016-0016/mms-2016-0016.xml?format=INTOptical Coherence Tomography (OCT)segmentation of retinal layersimage segmentationgraph theory
spellingShingle Stankiewicz Agnieszka
Marciniak Tomasz
Dąbrowski Adam
Stopa Marcin
Rakowicz Piotr
Marciniak Elżbieta
Improving Segmentation of 3D Retina Layers Based on Graph Theory Approach for Low Quality OCT Images
Metrology and Measurement Systems
Optical Coherence Tomography (OCT)
segmentation of retinal layers
image segmentation
graph theory
title Improving Segmentation of 3D Retina Layers Based on Graph Theory Approach for Low Quality OCT Images
title_full Improving Segmentation of 3D Retina Layers Based on Graph Theory Approach for Low Quality OCT Images
title_fullStr Improving Segmentation of 3D Retina Layers Based on Graph Theory Approach for Low Quality OCT Images
title_full_unstemmed Improving Segmentation of 3D Retina Layers Based on Graph Theory Approach for Low Quality OCT Images
title_short Improving Segmentation of 3D Retina Layers Based on Graph Theory Approach for Low Quality OCT Images
title_sort improving segmentation of 3d retina layers based on graph theory approach for low quality oct images
topic Optical Coherence Tomography (OCT)
segmentation of retinal layers
image segmentation
graph theory
url http://www.degruyter.com/view/j/mms.2016.23.issue-2/mms-2016-0016/mms-2016-0016.xml?format=INT
work_keys_str_mv AT stankiewiczagnieszka improvingsegmentationof3dretinalayersbasedongraphtheoryapproachforlowqualityoctimages
AT marciniaktomasz improvingsegmentationof3dretinalayersbasedongraphtheoryapproachforlowqualityoctimages
AT dabrowskiadam improvingsegmentationof3dretinalayersbasedongraphtheoryapproachforlowqualityoctimages
AT stopamarcin improvingsegmentationof3dretinalayersbasedongraphtheoryapproachforlowqualityoctimages
AT rakowiczpiotr improvingsegmentationof3dretinalayersbasedongraphtheoryapproachforlowqualityoctimages
AT marciniakelzbieta improvingsegmentationof3dretinalayersbasedongraphtheoryapproachforlowqualityoctimages