The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 [version 2; peer review: 2 approved]
We present a genome assembly of Caretta caretta (the Loggerhead sea turtle; Chordata, Testudines, Cheloniidae), generated from genomic data from two unrelated females. The genome sequence is 2.13 gigabases in size. The assembly has a busco completion score of 96.1% and N50 of 130.95 Mb. The majority...
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| Format: | Article |
| Language: | English |
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F1000 Research Ltd
2023-06-01
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| Series: | F1000Research |
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| Online Access: | https://f1000research.com/articles/12-336/v2 |
| _version_ | 1827902951659667456 |
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| author | Andrew Mungall Richard Moore Giorgio Bertorelle Yongjun Zhao Valeria Angelini Christopher Kyle Pawan Pandoh Sauro Pari Helen McDonald Heather Kirk Dean Cheng Eric Chuah Kieran O'Neill Kane Tse Jahanshah Ashkani Luka Culibrk Samantha Jones Sreeja Leelakumari Glenn Chang Steven Jones Sibelle Vilaça |
| author_facet | Andrew Mungall Richard Moore Giorgio Bertorelle Yongjun Zhao Valeria Angelini Christopher Kyle Pawan Pandoh Sauro Pari Helen McDonald Heather Kirk Dean Cheng Eric Chuah Kieran O'Neill Kane Tse Jahanshah Ashkani Luka Culibrk Samantha Jones Sreeja Leelakumari Glenn Chang Steven Jones Sibelle Vilaça |
| author_sort | Andrew Mungall |
| collection | DOAJ |
| description | We present a genome assembly of Caretta caretta (the Loggerhead sea turtle; Chordata, Testudines, Cheloniidae), generated from genomic data from two unrelated females. The genome sequence is 2.13 gigabases in size. The assembly has a busco completion score of 96.1% and N50 of 130.95 Mb. The majority of the assembly is scaffolded into 28 chromosomal representations with a remaining 2% of the assembly being excluded from these. |
| first_indexed | 2024-03-13T00:06:25Z |
| format | Article |
| id | doaj.art-0969dfd4ef164aeebf43e52b33a603b1 |
| institution | Directory Open Access Journal |
| issn | 2046-1402 |
| language | English |
| last_indexed | 2024-03-13T00:06:25Z |
| publishDate | 2023-06-01 |
| publisher | F1000 Research Ltd |
| record_format | Article |
| series | F1000Research |
| spelling | doaj.art-0969dfd4ef164aeebf43e52b33a603b12023-07-13T00:00:04ZengF1000 Research LtdF1000Research2046-14022023-06-0112151837The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 [version 2; peer review: 2 approved]Andrew Mungall0Richard Moore1Giorgio Bertorelle2Yongjun Zhao3Valeria Angelini4Christopher Kyle5Pawan Pandoh6Sauro Pari7Helen McDonald8Heather Kirk9Dean Cheng10Eric Chuah11Kieran O'Neill12Kane Tse13Jahanshah Ashkani14Luka Culibrk15Samantha Jones16https://orcid.org/0000-0001-9475-3609Sreeja Leelakumari17Glenn Chang18https://orcid.org/0000-0003-4008-1725Steven Jones19Sibelle Vilaça20https://orcid.org/0000-0002-6887-4703Canada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaDepartment of Life Sciences and Biotechnology, University of Ferrara, Ferrara, FE, 44121, ItalyCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaFondazione Cetacea Onlus, Riccione, RN, 47838, ItalyForensic Science Department, Trent University, Peterborough, Ontario, K9L 0G2, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaFondazione Cetacea Onlus, Riccione, RN, 47838, ItalyCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaGenome Science and Technology Graduate Program, University of British Columbia, Vancouver, British Columbia, V6T 1Z4, CanadaCanada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, V5Z 4S6, CanadaEnvironmental and Life Sciences Graduate Program, Trent University, Peterborough, Ontario, K9L 0G2, CanadaWe present a genome assembly of Caretta caretta (the Loggerhead sea turtle; Chordata, Testudines, Cheloniidae), generated from genomic data from two unrelated females. The genome sequence is 2.13 gigabases in size. The assembly has a busco completion score of 96.1% and N50 of 130.95 Mb. The majority of the assembly is scaffolded into 28 chromosomal representations with a remaining 2% of the assembly being excluded from these.https://f1000research.com/articles/12-336/v2Caretta caretta Loggerhead sea turtle genome sequence chromosomal reptileeng |
| spellingShingle | Andrew Mungall Richard Moore Giorgio Bertorelle Yongjun Zhao Valeria Angelini Christopher Kyle Pawan Pandoh Sauro Pari Helen McDonald Heather Kirk Dean Cheng Eric Chuah Kieran O'Neill Kane Tse Jahanshah Ashkani Luka Culibrk Samantha Jones Sreeja Leelakumari Glenn Chang Steven Jones Sibelle Vilaça The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 [version 2; peer review: 2 approved] F1000Research Caretta caretta Loggerhead sea turtle genome sequence chromosomal reptile eng |
| title | The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 [version 2; peer review: 2 approved] |
| title_full | The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 [version 2; peer review: 2 approved] |
| title_fullStr | The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 [version 2; peer review: 2 approved] |
| title_full_unstemmed | The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 [version 2; peer review: 2 approved] |
| title_short | The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 [version 2; peer review: 2 approved] |
| title_sort | genome sequence of the loggerhead sea turtle caretta caretta linnaeus 1758 version 2 peer review 2 approved |
| topic | Caretta caretta Loggerhead sea turtle genome sequence chromosomal reptile eng |
| url | https://f1000research.com/articles/12-336/v2 |
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