Identification of new pyrazolyl piperidine molecules as factor Xa inhibitors: Design, synthesis, in silico, and biological evaluation

Coagulation factor Xa (FXa), a serine endopeptidase is a common coagulation factor activated as a result of the initiation of both intrinsic and extrinsic blood coagulation pathways. Hence, FXa has been regarded as an important pharmaceutical target for the treatment of thrombotic disorders. In this...

Full description

Bibliographic Details
Main Authors: Rahul H. Rayani, Jigar Y. Soni, Deepa R. Parmar, Rakesh V. Kusurkar, Ibrahim.H. Eissae, Ahmed M. Metwaly, Ahmed Khalil, Vishwanath Zunjar, Satyanarayana Battula, Sarfaraj Niazi
Format: Article
Language:English
Published: Elsevier 2022-01-01
Series:Results in Chemistry
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2211715622000741
_version_ 1811296730693500928
author Rahul H. Rayani
Jigar Y. Soni
Deepa R. Parmar
Rakesh V. Kusurkar
Ibrahim.H. Eissae
Ahmed M. Metwaly
Ahmed Khalil
Vishwanath Zunjar
Satyanarayana Battula
Sarfaraj Niazi
author_facet Rahul H. Rayani
Jigar Y. Soni
Deepa R. Parmar
Rakesh V. Kusurkar
Ibrahim.H. Eissae
Ahmed M. Metwaly
Ahmed Khalil
Vishwanath Zunjar
Satyanarayana Battula
Sarfaraj Niazi
author_sort Rahul H. Rayani
collection DOAJ
description Coagulation factor Xa (FXa), a serine endopeptidase is a common coagulation factor activated as a result of the initiation of both intrinsic and extrinsic blood coagulation pathways. Hence, FXa has been regarded as an important pharmaceutical target for the treatment of thrombotic disorders. In this study, we reported the design and synthesis of pyrazolyl piperidine analogs 4(a–h) as a new class of anticoagulant drug candidates. Among the synthesized analogs 4(a–h), compound 4a consisting of the 4-chlorophenyl substitution displayed the highest in vitro FXa inhibition activity with an IC50 value of 13.4 nM. The PT and aPTT assay indicated that compound 4a showed good anticoagulation activity compared to Heparin. Furthermore, docking studies suggested that the synthesized analogs displayed binding modes similar to the cocrystallized Rivaroxaban ligand. In addition, in-silico ADMET and DFT studies were carried out for all the designed compounds. Together, our study suggests that the compound (4a) displayed anti-coagulant activity through the inhibition of FXa.
first_indexed 2024-04-13T05:53:42Z
format Article
id doaj.art-0abed611090445ab8dda034f1d4afd70
institution Directory Open Access Journal
issn 2211-7156
language English
last_indexed 2024-04-13T05:53:42Z
publishDate 2022-01-01
publisher Elsevier
record_format Article
series Results in Chemistry
spelling doaj.art-0abed611090445ab8dda034f1d4afd702022-12-22T02:59:41ZengElsevierResults in Chemistry2211-71562022-01-014100355Identification of new pyrazolyl piperidine molecules as factor Xa inhibitors: Design, synthesis, in silico, and biological evaluationRahul H. Rayani0Jigar Y. Soni1Deepa R. Parmar2Rakesh V. Kusurkar3Ibrahim.H. Eissae4Ahmed M. Metwaly5Ahmed Khalil6Vishwanath Zunjar7Satyanarayana Battula8Sarfaraj Niazi9Department of Chemistry, Faculty of Basic and Applied Sciences, Madhav University, Abu Road, Sirohi, Rajasthan, IndiaDepartment of Chemistry, Faculty of Basic and Applied Sciences, Madhav University, Abu Road, Sirohi, Rajasthan, India; Corresponding author.Department of Chemistry, Faculty of Basic and Applied Sciences, Madhav University, Abu Road, Sirohi, Rajasthan, IndiaDepartment of Chemistry, Faculty of Basic and Applied Sciences, Madhav University, Abu Road, Sirohi, Rajasthan, IndiaPharmaceutical Medicinal Chemistry & Drug Design Department, Faculty of Pharmacy (Boys), Al-Azhar University, Cairo 11884, EgyptPharmacognosy and Medicinal Plants Department, Faculty of Pharmacy (Boys), Al- Azhar University, Cairo, EgyptDepartment of Chemistry, College of Science, King Faisal University, Al-Hofuf, Al-Ahsa 31982, Saudi Arabia; Chemistry Department, Faculty of Science, Zagazig University, Zagazig 44519, EgyptSchool of Engineering and Technology, Navrachana University, Vadodara, Gujarat, IndiaDepartment of Chemistry, Uka Tarsadia University, Maliba Campus, Bardoli, Gujarat, IndiaPiramal Pharma Limited – Discovery Solutions, Shirish Research Campus, PHARMEZ Plot-18, Sarkhej-Bavla Road, Matoda, Ahmedabad 382213, IndiaCoagulation factor Xa (FXa), a serine endopeptidase is a common coagulation factor activated as a result of the initiation of both intrinsic and extrinsic blood coagulation pathways. Hence, FXa has been regarded as an important pharmaceutical target for the treatment of thrombotic disorders. In this study, we reported the design and synthesis of pyrazolyl piperidine analogs 4(a–h) as a new class of anticoagulant drug candidates. Among the synthesized analogs 4(a–h), compound 4a consisting of the 4-chlorophenyl substitution displayed the highest in vitro FXa inhibition activity with an IC50 value of 13.4 nM. The PT and aPTT assay indicated that compound 4a showed good anticoagulation activity compared to Heparin. Furthermore, docking studies suggested that the synthesized analogs displayed binding modes similar to the cocrystallized Rivaroxaban ligand. In addition, in-silico ADMET and DFT studies were carried out for all the designed compounds. Together, our study suggests that the compound (4a) displayed anti-coagulant activity through the inhibition of FXa.http://www.sciencedirect.com/science/article/pii/S2211715622000741ADMETAnti-coagulationDFT studyFactor XaMolecular dockingPyrazolyl piperidine
spellingShingle Rahul H. Rayani
Jigar Y. Soni
Deepa R. Parmar
Rakesh V. Kusurkar
Ibrahim.H. Eissae
Ahmed M. Metwaly
Ahmed Khalil
Vishwanath Zunjar
Satyanarayana Battula
Sarfaraj Niazi
Identification of new pyrazolyl piperidine molecules as factor Xa inhibitors: Design, synthesis, in silico, and biological evaluation
Results in Chemistry
ADMET
Anti-coagulation
DFT study
Factor Xa
Molecular docking
Pyrazolyl piperidine
title Identification of new pyrazolyl piperidine molecules as factor Xa inhibitors: Design, synthesis, in silico, and biological evaluation
title_full Identification of new pyrazolyl piperidine molecules as factor Xa inhibitors: Design, synthesis, in silico, and biological evaluation
title_fullStr Identification of new pyrazolyl piperidine molecules as factor Xa inhibitors: Design, synthesis, in silico, and biological evaluation
title_full_unstemmed Identification of new pyrazolyl piperidine molecules as factor Xa inhibitors: Design, synthesis, in silico, and biological evaluation
title_short Identification of new pyrazolyl piperidine molecules as factor Xa inhibitors: Design, synthesis, in silico, and biological evaluation
title_sort identification of new pyrazolyl piperidine molecules as factor xa inhibitors design synthesis in silico and biological evaluation
topic ADMET
Anti-coagulation
DFT study
Factor Xa
Molecular docking
Pyrazolyl piperidine
url http://www.sciencedirect.com/science/article/pii/S2211715622000741
work_keys_str_mv AT rahulhrayani identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation
AT jigarysoni identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation
AT deeparparmar identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation
AT rakeshvkusurkar identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation
AT ibrahimheissae identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation
AT ahmedmmetwaly identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation
AT ahmedkhalil identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation
AT vishwanathzunjar identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation
AT satyanarayanabattula identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation
AT sarfarajniazi identificationofnewpyrazolylpiperidinemoleculesasfactorxainhibitorsdesignsynthesisinsilicoandbiologicalevaluation