The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)
Primulina tenuituba is a species in the Gesneriaceae family that is widely distributed in China. It is a karst-dwelling species with an enormous tolerance for extreme drought and high temperatures. The species is also used in traditional Chinese medicine. In this study, the complete chloroplast geno...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.2011446 |
| _version_ | 1797638617227591680 |
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| author | Tao Peng Luyan Tang Zhiruo Zeng Tianyun Zhang Jinyi Wang Xuping Zhou Bin Zhu Xueye Du Fang Wen |
| author_facet | Tao Peng Luyan Tang Zhiruo Zeng Tianyun Zhang Jinyi Wang Xuping Zhou Bin Zhu Xueye Du Fang Wen |
| author_sort | Tao Peng |
| collection | DOAJ |
| description | Primulina tenuituba is a species in the Gesneriaceae family that is widely distributed in China. It is a karst-dwelling species with an enormous tolerance for extreme drought and high temperatures. The species is also used in traditional Chinese medicine. In this study, the complete chloroplast genome of P. tenuituba was assembled and characterized for the first time. The complete chloroplast genome exhibited a typical quadripartite cycle of 153,236 bp in length, including a pair of inverted repeats (IRs) of 25,494 bp, which were separated by a large single-copy (LSC) region of 84,364 bp and a small single copy (SSC) region of 17,884 bp. The GC content was 37.6%. The complete chloroplast genome of P. tenuituba contains 114 genes, including 80 protein-coding genes, 30 tRNAs genes, and four rRNAs. The phylogenetic analysis showed that P. tenuituba is closely related to P. eburnea. The newly reported chloroplast genome of P. tenuituba would provide valuable data for further studies on its evolution and adaptation mechanism. |
| first_indexed | 2024-03-11T13:06:09Z |
| format | Article |
| id | doaj.art-0ac1705151e84bfeb63e85ad49593d46 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:06:09Z |
| publishDate | 2022-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-0ac1705151e84bfeb63e85ad49593d462023-11-03T14:36:01ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-03-017350750910.1080/23802359.2021.20114462011446The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)Tao Peng0Luyan Tang1Zhiruo Zeng2Tianyun Zhang3Jinyi Wang4Xuping Zhou5Bin Zhu6Xueye Du7Fang Wen8School of Life Sciences, Guizhou Normal UniversitySchool of Life Sciences, Guizhou Normal UniversitySchool of Life Sciences, Guizhou Normal UniversitySchool of Life Sciences, Guizhou Normal UniversitySchool of Life Sciences, Guizhou Normal UniversitySchool of Life Sciences, Guizhou Normal UniversitySchool of Life Sciences, Guizhou Normal UniversitySchool of Life Sciences, Guizhou Normal UniversityGuangxi Key Laboratory of Plant Conservation and Restoration Ecology in Karst Terrain, Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of SciencesPrimulina tenuituba is a species in the Gesneriaceae family that is widely distributed in China. It is a karst-dwelling species with an enormous tolerance for extreme drought and high temperatures. The species is also used in traditional Chinese medicine. In this study, the complete chloroplast genome of P. tenuituba was assembled and characterized for the first time. The complete chloroplast genome exhibited a typical quadripartite cycle of 153,236 bp in length, including a pair of inverted repeats (IRs) of 25,494 bp, which were separated by a large single-copy (LSC) region of 84,364 bp and a small single copy (SSC) region of 17,884 bp. The GC content was 37.6%. The complete chloroplast genome of P. tenuituba contains 114 genes, including 80 protein-coding genes, 30 tRNAs genes, and four rRNAs. The phylogenetic analysis showed that P. tenuituba is closely related to P. eburnea. The newly reported chloroplast genome of P. tenuituba would provide valuable data for further studies on its evolution and adaptation mechanism.http://dx.doi.org/10.1080/23802359.2021.2011446primulina tenuitubachloroplast genomephylogenetics |
| spellingShingle | Tao Peng Luyan Tang Zhiruo Zeng Tianyun Zhang Jinyi Wang Xuping Zhou Bin Zhu Xueye Du Fang Wen The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) Mitochondrial DNA. Part B. Resources primulina tenuituba chloroplast genome phylogenetics |
| title | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
| title_full | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
| title_fullStr | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
| title_full_unstemmed | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
| title_short | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
| title_sort | complete chloroplast genome of a karst dwelling plant primulina tenuituba gesneriaceae |
| topic | primulina tenuituba chloroplast genome phylogenetics |
| url | http://dx.doi.org/10.1080/23802359.2021.2011446 |
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