The Molecular Detection of Class B and Class D Carbapenemases in Clinical Strains of <i>Acinetobacter calcoaceticus-baumannii</i> Complex: The High Burden of Antibiotic Resistance and the Co-Existence of Carbapenemase Genes

The emergence of carbapenem-resistant <i>Acinetobacter calcoaceticus</i>-<i>baumannii</i> complex (CRACB) in clinical environments is a significant global concern. These critical pathogens have shown resistance to a broad spectrum of antibacterial drugs, including carbapenems...

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Main Authors: Hasan Ejaz, Muhammad Usman Qamar, Kashaf Junaid, Sonia Younas, Zeeshan Taj, Syed Nasir Abbas Bukhari, Abualgasim E. Abdalla, Khalid O. A. Abosalif, Naveed Ahmad, Zikria Saleem, Eman H. M. Salem
Format: Article
Language:English
Published: MDPI AG 2022-08-01
Series:Antibiotics
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Online Access:https://www.mdpi.com/2079-6382/11/9/1168
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Summary:The emergence of carbapenem-resistant <i>Acinetobacter calcoaceticus</i>-<i>baumannii</i> complex (CRACB) in clinical environments is a significant global concern. These critical pathogens have shown resistance to a broad spectrum of antibacterial drugs, including carbapenems, mostly due to the acquisition of various β-lactamase genes. Clinical samples (n = 1985) were collected aseptically from multiple sources and grown on blood and MacConkey agar. Isolates and antimicrobial susceptibility were confirmed with the VITEK-2 system. The modified Hodge test confirmed the CRACB phenotype, and specific PCR primers were used for the molecular identification of <i>bla</i><sub>OXA</sub> and <i>bla</i><sub>NDM</sub> genes. Of the 1985 samples, 1250 (62.9%) were culture-positive and 200 (43.9%) were CRACB isolates. Of these isolates, 35.4% were recovered from pus samples and 23.5% from tracheal secretions obtained from patients in intensive care units (49.3%) and medical wards (20.2%). An antibiogram indicated that 100% of the CRACB isolates were resistant to β-lactam antibiotics and β-lactam inhibitors, 86.5% to ciprofloxacin, and 83.5% to amikacin, while the most effective antibiotics were tigecycline and colistin. The CRACB isolates displayed resistance to eight different AWaRe classes of antibiotics. All isolates exhibited the <i>bla</i><sub>OXA-51</sub> gene, while <i>bla</i><sub>OXA-23</sub> was present in 94.5%, <i>bla</i><sub>VIM</sub> in 37%, and <i>bla</i><sub>NDM</sub> in 14% of the isolates. The <i>bla</i><sub>OXA-51</sub>, <i>bla</i><sub>OXA-23</sub>, and <i>bla</i><sub>OXA-24</sub> genes co-existed in 13 (6.5%) isolates. CRACB isolates with co-existing <i>bla</i><sub>OXA-23</sub>, <i>bla</i><sub>OXA-24</sub>, <i>bla</i><sub>NDM</sub>, <i>bla</i><sub>OXA-51</sub> and <i>bla</i><sub>VIM</sub> genes were highly prevalent in clinical samples from Pakistan. CRACB strains were highly critical pathogens and presented resistance to virtually all antibacterial drugs, except tigecycline and colistin.
ISSN:2079-6382